| GTDB-Tk: a toolkit to classify genomes with the Genome Taxonomy Database PA Chaumeil, AJ Mussig, P Hugenholtz, DH Parks Bioinformatics 36 (6), 1925-1927, 2020 | 3513 | 2020 |
| A complete domain-to-species taxonomy for Bacteria and Archaea DH Parks, M Chuvochina, PA Chaumeil, C Rinke, AJ Mussig, ... Nature biotechnology 38 (9), 1079-1086, 2020 | 1130 | 2020 |
| GTDB: an ongoing census of bacterial and archaeal diversity through a phylogenetically consistent, rank normalized and complete genome-based taxonomy DH Parks, M Chuvochina, C Rinke, AJ Mussig, PA Chaumeil, ... Nucleic acids research 50 (D1), D785-D794, 2022 | 1028 | 2022 |
| GTDB-Tk v2: memory friendly classification with the genome taxonomy database PA Chaumeil, AJ Mussig, P Hugenholtz, DH Parks Bioinformatics 38 (23), 5315-5316, 2022 | 511 | 2022 |
| A standardized archaeal taxonomy for the Genome Taxonomy Database C Rinke, M Chuvochina, AJ Mussig, PA Chaumeil, AA Davín, DW Waite, ... Nature microbiology 6 (7), 946-959, 2021 | 291* | 2021 |
| Proposal of names for 329 higher rank taxa defined in the Genome Taxonomy Database under two prokaryotic codes M Chuvochina, AJ Mussig, PA Chaumeil, A Skarshewski, C Rinke, ... FEMS Microbiology Letters 370, fnad071, 2023 | 20 | 2023 |
| Genome Taxonomy Database and SeqCode: microbial taxonomy and nomenclature in the age of big sequence data M Chuvochina, C Rinke, A Mussig, PA Chaumeil, D Parks, P Hugenholtz Biodiversity Information Science and Standards 7, e111135, 2023 | 2 | 2023 |
| Putative genome contamination has minimal impact on the GTDB taxonomy AJ Mussig, PA Chaumeil, M Chuvochina, C Rinke, DH Parks, ... Microbial Genomics 10 (5), 001256, 2024 | 1 | 2024 |
Pierre-Alain ChaumeilBioinformatician, University of QueenslandVerified email at uq.edu.au
