Nikos C Kyrpides
Nikos C Kyrpides
DOE Joint Genome Institute
Verified email at lbl.gov - Homepage
TitleCited byYear
Structure, function and diversity of the healthy human microbiome
C Huttenhower, D Gevers, R Knight, S Abubucker, JH Badger, ...
nature 486 (7402), 207, 2012
48412012
The complete genome sequence of the hyperthermophilic, sulphate-reducing archaeon Archaeoglobus fulgidus
HP Klenk, RA Clayton, JF Tomb, O White, KE Nelson, KA Ketchum, ...
Nature 390 (6658), 364-370, 1997
1554*1997
Protein interaction maps for complete genomes based on gene fusion events
AJ Enright, I Iliopoulos, NC Kyrpides, CA Ouzounis
Nature 402 (6757), 86, 1999
13181999
Insights into the phylogeny and coding potential of microbial dark matter
C Rinke, P Schwientek, A Sczyrba, NN Ivanova, IJ Anderson, JF Cheng, ...
Nature 499 (7459), 431, 2013
13112013
A framework for human microbiome research
BA Methé, KE Nelson, M Pop, HH Creasy, MG Giglio, C Huttenhower, ...
nature 486 (7402), 215, 2012
12852012
Metagenomic and functional analysis of hindgut microbiota of a wood-feeding higher termite
F Warnecke, P Luginbühl, N Ivanova, M Ghassemian, TH Richardson, ...
Nature 450 (7169), 560, 2007
12022007
The minimum information about a genome sequence (MIGS) specification
D Field, G Garrity, T Gray, N Morrison, J Selengut, P Sterk, T Tatusova, ...
Nature biotechnology 26 (5), 541, 2008
11032008
IMG: the integrated microbial genomes database and comparative analysis system
VM Markowitz, IMA Chen, K Palaniappan, K Chu, E Szeto, Y Grechkin, ...
Nucleic acids research 40 (D1), D115-D122, 2011
10192011
A phylogeny-driven genomic encyclopaedia of Bacteria and Archaea
D Wu, P Hugenholtz, K Mavromatis, R Pukall, E Dalin, NN Ivanova, ...
Nature 462 (7276), 1056, 2009
9142009
Genome sequence of Bacillus cereus and comparative analysis with Bacillus anthracis
N Ivanova, A Sorokin, I Anderson, N Galleron, B Candelon, V Kapatral, ...
Nature 423 (6935), 87, 2003
8502003
The Genomes On Line Database (GOLD) in 2009: status of genomic and metagenomic projects and their associated metadata
K Liolios, IMA Chen, K Mavromatis, N Tavernarakis, P Hugenholtz, ...
Nucleic acids research 38 (suppl_1), D346-D354, 2009
8132009
IMG ER: a system for microbial genome annotation expert review and curation
VM Markowitz, K Mavromatis, NN Ivanova, IMA Chen, K Chu, ...
Bioinformatics 25 (17), 2271-2278, 2009
7912009
Experimental determination and system level analysis of essential genes in Escherichia coli MG1655
SY Gerdes, MD Scholle, JW Campbell, G Balazsi, E Ravasz, ...
Journal of bacteriology 185 (19), 5673-5684, 2003
7822003
Metagenomic analysis of two enhanced biological phosphorus removal (EBPR) sludge communities
HG Martin, N Ivanova, V Kunin, F Warnecke, KW Barry, AC McHardy, ...
Nature biotechnology 24 (10), 1263, 2006
6552006
The genome sequence of the facultative intracellular pathogen Brucella melitensis
VG DelVecchio, V Kapatral, RJ Redkar, G Patra, C Mujer, T Los, ...
Proceedings of the National Academy of Sciences 99 (1), 443-448, 2002
6172002
The Wolbachia genome of Brugia malayi: endosymbiont evolution within a human pathogenic nematode
J Foster, M Ganatra, I Kamal, J Ware, K Makarova, N Ivanova, ...
PLoS biology 3 (4), e121, 2005
5552005
A catalog of reference genomes from the human microbiome.
KE Nelson, GM Weinstock, SK Highlander, KC Worley, HH Creasy, ...
Science (New York, NY) 328 (5981), 994-999, 2010
5382010
Toward an online repository of standard operating procedures (SOPs) for (meta) genomic annotation
SV Angiuoli, A Gussman, W Klimke, G Cochrane, D Field, GM Garrity, ...
OMICS A Journal of Integrative Biology 12 (2), 137-141, 2008
5312008
The Genomes OnLine Database (GOLD) v. 4: status of genomic and metagenomic projects and their associated metadata
I Pagani, K Liolios, J Jansson, IMA Chen, T Smirnova, B Nosrat, ...
Nucleic acids research 40 (D1), D571-D579, 2011
5232011
GenePRIMP: a gene prediction improvement pipeline for prokaryotic genomes
A Pati, NN Ivanova, N Mikhailova, G Ovchinnikova, SD Hooper, A Lykidis, ...
Nature methods 7 (6), 455, 2010
5092010
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Articles 1–20