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Bong-Hyun Kim
Bong-Hyun Kim
National Cancer Institute
Verified email at nih.gov - Homepage
Title
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Cited by
Year
ZDOCK server: interactive docking prediction of protein–protein complexes and symmetric multimers
BG Pierce, K Wiehe, H Hwang, BH Kim, T Vreven, Z Weng
Bioinformatics 30 (12), 1771-1773, 2014
15082014
PROMALS3D: a tool for multiple protein sequence and structure alignments
J Pei, BH Kim, NV Grishin
Nucleic acids research 36 (7), 2295-2300, 2008
13882008
Structure prediction for CASP8 with all‐atom refinement using Rosetta
S Raman, R Vernon, J Thompson, M Tyka, R Sadreyev, J Pei, D Kim, ...
Proteins: Structure, Function, and Bioinformatics 77 (S9), 89-99, 2009
5872009
Factorbook. org: a Wiki-based database for transcription factor-binding data generated by the ENCODE consortium
J Wang, J Zhuang, S Iyer, XY Lin, MC Greven, BH Kim, J Moore, ...
Nucleic acids research 41 (D1), D171-D176, 2012
4302012
ECOD: an evolutionary classification of protein domains
H Cheng, RD Schaeffer, Y Liao, LN Kinch, J Pei, S Shi, BH Kim, ...
PLoS computational biology 10 (12), e1003926, 2014
3322014
Principles of regulatory information conservation between mouse and human
Y Cheng, Z Ma, BH Kim, W Wu, P Cayting, AP Boyle, V Sundaram, X Xing, ...
Nature 515 (7527), 371-375, 2014
2772014
Expression profiling of nuclear receptors in human and mouse embryonic stem cells
CQ Xie, Y Jeong, M Fu, AL Bookout, MT Garcia-Barrio, T Sun, B Kim, ...
Molecular endocrinology 23 (5), 724-733, 2009
882009
Discrete–continuous duality of protein structure space
RI Sadreyev, BH Kim, NV Grishin
Current opinion in structural biology 19 (3), 321-328, 2009
792009
PROMALS web server for accurate multiple protein sequence alignments
J Pei, BH Kim, M Tang, NV Grishin
Nucleic acids research 35 (suppl_2), W649-W652, 2007
732007
Genome Sequence of the Thermotolerant Yeast Kluyveromyces marxianus var. marxianus KCTC 17555
H Jeong, DH Lee, SH Kim, HJ Kim, K Lee, JY Song, BK Kim, BH Sung, ...
Eukaryotic cell 11 (12), 1584-1585, 2012
642012
The full transcription map of mouse papillomavirus type 1 (MmuPV1) in mouse wart tissues
XY Xue, V Majerciak, A Uberoi, BH Kim, D Gotte, X Chen, M Cam, ...
PLoS Pathogens 13 (11), e1006715, 2017
502017
Cancer classification of single-cell gene expression data by neural network
BH Kim, K Yu, PCW Lee
Bioinformatics 36 (5), 1360-1366, 2020
482020
HNRNPH1-dependent splicing of a fusion oncogene reveals a targetable RNA G-quadruplex interaction
C Neckles, RE Boer, N Aboreden, AM Cross, RL Walker, BH Kim, S Kim, ...
Rna 25 (12), 1731-1750, 2019
412019
In situ transcriptome characteristics are lost following culture adaptation of adult cardiac stem cells
T Kim, OH Echeagaray, BJ Wang, A Casillas, KM Broughton, BH Kim, ...
Scientific reports 8 (1), 12060, 2018
412018
Analysis of CASP8 targets, predictions and assessment methods
SY Shi, J Pei, RI Sadreyev, LN Kinch, I Majumdar, J Tong, H Cheng, ...
Database: the journal of biological databases and curation 2009, bap003, 2009
412009
MALISAM: a database of structurally analogous motifs in proteins
H Cheng, BH Kim, NV Grishin
Nucleic acids research 36 (suppl_1), D211-D217, 2007
392007
COMPASS server for remote homology inference
RI Sadreyev, M Tang, BH Kim, NV Grishin
Nucleic acids research 35 (suppl_2), W653-W658, 2007
352007
O-GlcNAcase is an RNA polymerase II elongation factor coupled to pausing factors SPT5 and TIF1β
M Resto, BH Kim, AG Fernandez, BJ Abraham, K Zhao, BA Lewis
Journal of Biological Chemistry 291 (43), 22703-22713, 2016
342016
COMPASS server for homology detection: improved statistical accuracy, speed and functionality
RI Sadreyev, M Tang, BH Kim, NV Grishin
Nucleic acids research 37 (suppl_2), W90-W94, 2009
292009
MALIDUP: a database of manually constructed structure alignments for duplicated domain pairs
H Cheng, BH Kim, NV Grishin
Proteins: Structure, Function, and Bioinformatics 70 (4), 1162-1166, 2008
282008
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Articles 1–20