|The Skyline ecosystem: Informatics for quantitative mass spectrometry proteomics|
LK Pino, BC Searle, JG Bollinger, B Nunn, B MacLean, MJ MacCoss
Mass spectrometry reviews, 2017
|Chromatogram libraries improve peptide detection and quantification by data independent acquisition mass spectrometry|
BC Searle, LK Pino, JD Egertson, YS Ting, RT Lawrence, BX MacLean, ...
Nature communications 9 (1), 5128, 2018
|Reduced-representation phosphosignatures measured by quantitative targeted MS capture cellular states and enable large-scale comparison of drug-induced phenotypes|
JG Abelin, J Patel, X Lu, CM Feeney, L Fagbami, AL Creech, R Hu, D Lam, ...
Molecular & Cellular Proteomics 15 (5), 1622-1641, 2016
|Calibration Using a Single-Point External Reference Material Harmonizes Quantitative Mass Spectrometry Proteomics Data between Platforms and Laboratories|
LK Pino, BC Searle, EL Huang, WS Noble, AN Hoofnagle, MJ MacCoss
Analytical Chemistry 90 (21), 13112-13117, 2018
|Acquiring and analyzing data independent acquisition proteomics experiments without spectrum libraries|
LK Pino, SC Just, MJ MacCoss, BC Searle
Molecular & Cellular Proteomics 19 (7), 1088-1103, 2020
|Late-life restoration of mitochondrial function reverses cardiac dysfunction in old mice|
YA Chiao, H Zhang, M Sweetwyne, J Whitson, YS Ting, N Basisty, ...
Elife 9, e55513, 2020
|Nonlinear regression improves accuracy of characterization of multiplexed mass spectrometric assays|
C Galitzine, JD Egertson, S Abbatiello, CM Henderson, LK Pino, ...
Molecular & Cellular Proteomics 17 (5), 913-924, 2018
|Highly Parallel Quantification and Compartment Localization of Transcription Factors and Nuclear Proteins|
AJ Federation, V Nandakumar, BC Searle, A Stergachis, H Wang, LK Pino, ...
Cell Reports 30 (8), 2463-2471. e5, 2020
|Matrix-matched calibration curves for assessing analytical figures of merit in quantitative proteomics|
LK Pino, BC Searle, HY Yang, AN Hoofnagle, WS Noble, MJ MacCoss
Journal of Proteome Research 19 (3), 1147-1153, 2020
|Emerging mass spectrometry-based proteomics methodologies for novel biomedical applications|
LK Pino, J Rose, A O'Broin, S Shah, B Schilling
Biochemical Society Transactions 48 (5), 1953-1966, 2020
|2018 YPIC Challenge: A case study in characterizing an unknown protein sample|
L Pino, A Lin, W Bittremieux
Journal of proteome research 18 (11), 3936-3943, 2019
|Methods for harmonizing and calibrating quantitative mass spectrometry experiments|
|Improved SILAC quantification with data independent acquisition to investigate bortezomib-induced protein degradation|
LK Pino, J Baeza, R Lauman, B Schilling, BA Garcia