Joel Dudley
Joel Dudley
Institute Director and Associate Professor, Icahn School of Medicine at Mount Sinai
Verified email at - Homepage
Cited by
Cited by
MEGA4: molecular evolutionary genetics analysis (MEGA) software version 4.0
K Tamura, J Dudley, M Nei, S Kumar
Molecular biology and evolution 24 (8), 1596-1599, 2007
MEGA: a biologist-centric software for evolutionary analysis of DNA and protein sequences
S Kumar, M Nei, J Dudley, K Tamura
Briefings in bioinformatics 9 (4), 299-306, 2008
Deep learning for healthcare: review, opportunities and challenges
R Miotto, F Wang, S Wang, X Jiang, JT Dudley
Briefings in bioinformatics 19 (6), 1236-1246, 2018
Deep patient: an unsupervised representation to predict the future of patients from the electronic health records
R Miotto, L Li, BA Kidd, JT Dudley
Scientific reports 6 (1), 1-10, 2016
Personal omics profiling reveals dynamic molecular and medical phenotypes
R Chen, GI Mias, J Li-Pook-Than, L Jiang, HYK Lam, R Chen, E Miriami, ...
Cell 148 (6), 1293-1307, 2012
TimeTree: a public knowledge-base of divergence times among organisms
SB Hedges, J Dudley, S Kumar
Bioinformatics 22 (23), 2971-2972, 2006
Gene expression elucidates functional impact of polygenic risk for schizophrenia
M Fromer, P Roussos, SK Sieberts, JS Johnson, DH Kavanagh, ...
Nature neuroscience 19 (11), 1442-1453, 2016
Artificial intelligence in cardiology
KW Johnson, J Torres Soto, BS Glicksberg, K Shameer, R Miotto, M Ali, ...
Journal of the American College of Cardiology 71 (23), 2668-2679, 2018
Discovery and preclinical validation of drug indications using compendia of public gene expression data
M Sirota, JT Dudley, J Kim, AP Chiang, AA Morgan, A Sweet-Cordero, ...
Science translational medicine 3 (96), 96ra77-96ra77, 2011
Clinical assessment incorporating a personal genome
EA Ashley, AJ Butte, MT Wheeler, R Chen, TE Klein, FE Dewey, ...
The Lancet 375 (9725), 1525-1535, 2010
Computational repositioning of the anticonvulsant topiramate for inflammatory bowel disease
JT Dudley, M Sirota, M Shenoy, RK Pai, S Roedder, AP Chiang, ...
Science translational medicine 3 (96), 96ra76-96ra76, 2011
Multiscale analysis of independent Alzheimer’s cohorts finds disruption of molecular, genetic, and clinical networks by human herpesvirus
B Readhead, JV Haure-Mirande, CC Funk, MA Richards, P Shannon, ...
Neuron 99 (1), 64-82. e7, 2018
Exploiting drug–disease relationships for computational drug repositioning
JT Dudley, T Deshpande, AJ Butte
Briefings in bioinformatics 12 (4), 303-311, 2011
Identification of type 2 diabetes subgroups through topological analysis of patient similarity
L Li, WY Cheng, BS Glicksberg, O Gottesman, R Tamler, R Chen, ...
Science translational medicine 7 (311), 311ra174-311ra174, 2015
Machine learning in cardiovascular medicine: are we there yet?
K Shameer, KW Johnson, BS Glicksberg, JT Dudley, PP Sengupta
Heart 104 (14), 1156-1164, 2018
Natural language processing of clinical notes on chronic diseases: systematic review
S Sheikhalishahi, R Miotto, JT Dudley, A Lavelli, F Rinaldi, V Osmani
JMIR medical informatics 7 (2), e12239, 2019
Network-based elucidation of human disease similarities reveals common functional modules enriched for pluripotent drug targets
S Suthram, JT Dudley, AP Chiang, R Chen, TJ Hastie, AJ Butte
PLoS computational biology 6 (2), e1000662, 2010
A drug repositioning approach identifies tricyclic antidepressants as inhibitors of small cell lung cancer and other neuroendocrine tumors
NS Jahchan, JT Dudley, PK Mazur, N Flores, D Yang, A Palmerton, ...
Cancer discovery 3 (12), 1364-1377, 2013
Machine-learning algorithms to automate morphological and functional assessments in 2D echocardiography
S Narula, K Shameer, AM Salem Omar, JT Dudley, PP Sengupta
Journal of the American College of Cardiology 68 (21), 2287-2295, 2016
Necroptosis activation in Alzheimer's disease
A Caccamo, C Branca, IS Piras, E Ferreira, MJ Huentelman, WS Liang, ...
Nature neuroscience 20 (9), 1236-1246, 2017
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