Bernie J. Daigle, Jr.
Bernie J. Daigle, Jr.
Associate Professor of Biological Sciences and Computer Science at The University of Memphis
Verified email at - Homepage
Cited by
Cited by
Mucosal biofilm formation on middle-ear mucosa in the chinchilla model of otitis media
GD Ehrlich, R Veeh, X Wang, JW Costerton, JD Hayes, FZ Hu, BJ Daigle, ...
Jama 287 (13), 1710-1715, 2002
Independent component analysis: mining microarray data for fundamental human gene expression modules
JM Engreitz, BJ Daigle Jr, JJ Marshall, RB Altman
Journal of biomedical informatics 43 (6), 932-944, 2010
Accelerated maximum likelihood parameter estimation for stochastic biochemical systems
BJ Daigle, MK Roh, LR Petzold, J Niemi
BMC bioinformatics 13 (1), 1-18, 2012
Stochastic simulation service: bridging the gap between the computational expert and the biologist
B Drawert, A Hellander, B Bales, D Banerjee, G Bellesia, BJ Daigle Jr, ...
PLoS computational biology 12 (12), e1005220, 2016
Automated estimation of rare event probabilities in biochemical systems
BJ Daigle Jr, MK Roh, DT Gillespie, LR Petzold
The Journal of chemical physics 134 (4), 01B628, 2011
Core module biomarker identification with network exploration for breast cancer metastasis
R Yang, BJ Daigle, LR Petzold, FJ Doyle
BMC bioinformatics 13 (1), 1-11, 2012
Multi-omic biomarker identification and validation for diagnosing warzone-related post-traumatic stress disorder
KR Dean, R Hammamieh, SH Mellon, D Abu-Amara, JD Flory, G Guffanti, ...
Molecular psychiatry 25 (12), 3337-3349, 2020
Inferring single-cell gene expression mechanisms using stochastic simulation
BJ Daigle Jr, M Soltani, LR Petzold, A Singh
Bioinformatics 31 (9), 1428-1435, 2015
Whole-genome DNA methylation status associated with clinical PTSD measures of OIF/OEF veterans
R Hammamieh, N Chakraborty, A Gautam, S Muhie, R Yang, D Donohue, ...
Translational psychiatry 7 (7), e1169-e1169, 2017
State-dependent doubly weighted stochastic simulation algorithm for automatic characterization of stochastic biochemical rare events
MK Roh, BJ Daigle Jr, DT Gillespie, LR Petzold
The Journal of chemical physics 135 (23), 234108, 2011
Systems biology approach to understanding post-traumatic stress disorder
GS Thakur, BJ Daigle Jr, KR Dean, Y Zhang, M Rodriguez-Fernandez, ...
Molecular BioSystems 11 (4), 980-993, 2015
Mice lacking the β2 adrenergic receptor have a unique genetic profile before and after focal brain ischaemia
RE White, C Palm, L Xu, E Ling, M Ginsburg, JD Bernie Jr, R Han, ...
ASN neuro 4 (5), AN20110020, 2012
Core modular blood and brain biomarkers in social defeat mouse model for post traumatic stress disorder
R Yang, BJ Daigle Jr, SY Muhie, R Hammamieh, M Jett, L Petzold, ...
BMC systems biology 7 (1), 1-12, 2013
M-BISON: microarray-based integration of data sources using networks
BJ Daigle, RB Altman
BMC bioinformatics 9 (1), 1-17, 2008
Using pre-existing microarray datasets to increase experimental power: application to insulin resistance
BJ Daigle Jr, A Deng, T McLaughlin, SW Cushman, MC Cam, G Reaven, ...
PLoS computational biology 6 (3), e1000718, 2010
Prognostic analysis of histopathological images using pre-trained convolutional neural networks: application to hepatocellular carcinoma
L Lu, BJ Daigle Jr
PeerJ 8, e8668, 2020
Identification of disease states associated with coagulopathy in trauma
Y Zhang, TB Wu, BJ Daigle, M Cohen, L Petzold
BMC medical informatics and decision making 16 (1), 1-9, 2016
Current progress in static and dynamic modeling of biological networks
BJ Daigle, BS Srinivasan, JA Flannick, AF Novak, S Batzoglou
Systems Biology for Signaling Networks, 13-73, 2010
Nonrandom insertion site preferences for the SB transposon in vitro and in vivo
SR Yant, XL Wu, Y Huang, B Daigle
Molecular Therapy 9, S309-S310, 2004
icHET: interactive visualization of cytoplasmic heteroplasmy
V Phan, DT Pham, C Melton, AJ Ramsey, BJ Daigle Jr, JR Mandel
Bioinformatics 35 (21), 4411-4412, 2019
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