Robert Kofler
Robert Kofler
PI at Institute of Population Genetics
Verified email at vetmeduni.ac.at - Homepage
TitleCited byYear
PoPoolation2: identifying differentiation between populations using sequencing of pooled DNA samples (Pool-Seq)
R Kofler, RV Pandey, C Schlötterer
Bioinformatics 27 (24), 3435-3436, 2011
3422011
Sequencing pools of individuals—mining genome-wide polymorphism data without big funding
C Schlötterer, R Tobler, R Kofler, V Nolte
Nature Reviews Genetics 15 (11), 749, 2014
3162014
SciRoKo: a new tool for whole genome microsatellite search and investigation
R Kofler, C Schlötterer, T Lelley
Bioinformatics 23 (13), 1683-1685, 2007
3072007
PoPoolation: a toolbox for population genetic analysis of next generation sequencing data from pooled individuals
R Kofler, P Orozco-terWengel, N De Maio, RV Pandey, V Nolte, A Futschik, ...
PloS one 6 (1), e15925, 2011
3042011
Genome‐wide patterns of latitudinal differentiation among populations of Drosophila melanogaster from North America
DK Fabian, M Kapun, V Nolte, R Kofler, PS Schmidt, C Schlötterer, T Flatt
Molecular ecology 21 (19), 4748-4769, 2012
1832012
Adaptation of Drosophila to a novel laboratory environment reveals temporally heterogeneous trajectories of selected alleles
P Orozco‐Terwengel, M Kapun, V Nolte, R Kofler, T Flatt, C Schlötterer
Molecular ecology 21 (20), 4931-4941, 2012
1452012
Microsatellites for the genus Cucurbita and an SSR-based genetic linkage map of Cucurbita pepo L.
L Gong, G Stift, R Kofler, M Pachner, T Lelley
Theoretical and Applied Genetics 117 (1), 37-48, 2008
1432008
Sequencing of pooled DNA samples (Pool-Seq) uncovers complex dynamics of transposable element insertions in Drosophila melanogaster
R Kofler, AJ Betancourt, C Schlötterer
PLoS genetics 8 (1), e1002487, 2012
1402012
Combining experimental evolution with next-generation sequencing: a powerful tool to study adaptation from standing genetic variation
C Schlötterer, R Kofler, E Versace, R Tobler, SU Franssen
Heredity 114 (5), 431, 2015
1002015
Massive Habitat-Specific Genomic Response in D. melanogaster Populations during Experimental Evolution in Hot and Cold Environments
R Tobler, SU Franssen, R Kofler, P Orozco-terWengel, V Nolte, ...
Molecular biology and evolution 31 (2), 364-375, 2013
932013
A first survey of the rye (Secale cereale) genome composition through BAC end sequencing of the short arm of chromosome 1R
J Bartoš, E Paux, R Kofler, M Havránková, D Kopecký, P Suchánková, ...
BMC Plant Biology 8 (1), 95, 2008
892008
Exploring the gonad transcriptome of two extreme male pigs with RNA-seq
A Esteve-Codina, R Kofler, N Palmieri, G Bussotti, C Notredame, ...
BMC genomics 12 (1), 552, 2011
832011
A guide for the design of evolve and resequencing studies
R Kofler, C Schlötterer
Molecular biology and evolution 31 (2), 474-483, 2013
712013
Genome-wide patterns of natural variation reveal strong selective sweeps and ongoing genomic conflict in Drosophila mauritiana
V Nolte, RV Pandey, R Kofler, C Schlötterer
Genome Research, 2012
662012
Gowinda: unbiased analysis of gene set enrichment for genome-wide association studies
R Kofler, C Schlötterer
Bioinformatics 28 (15), 2084-2085, 2012
642012
Survey of microsatellite clustering in eight fully sequenced species sheds light on the origin of compound microsatellites
R Kofler, C Schlötterer, E Luschützky, T Lelley
BMC genomics 9 (1), 612, 2008
542008
Development of microsatellite markers specific for the short arm of rye (Secale cereale L.) chromosome 1
R Kofler, J Bartoš, L Gong, G Stift, P Suchánková, H Šimková, M Berenyi, ...
Theoretical and applied genetics 117 (6), 915-926, 2008
532008
The recent invasion of natural Drosophila simulans populations by the P-element
R Kofler, T Hill, V Nolte, AJ Betancourt, C Schlötterer
Proceedings of the National Academy of Sciences 112 (21), 6659-6663, 2015
462015
Tempo and mode of transposable element activity in Drosophila
R Kofler, V Nolte, C Schlötterer
PLoS genetics 11 (7), e1005406, 2015
402015
Pool‐hmm: a Python program for estimating the allele frequency spectrum and detecting selective sweeps from next generation sequencing of pooled samples
S Boitard, R Kofler, P Françoise, D Robelin, C Schlötterer, A Futschik
Molecular ecology resources 13 (2), 337-340, 2013
362013
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