Rima Chaudhuri
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A noncovalent class of papain-like protease/deubiquitinase inhibitors blocks SARS virus replication
K Ratia, S Pegan, J Takayama, K Sleeman, M Coughlin, S Baliji, ...
Proceedings of the National Academy of Sciences 105 (42), 16119-16124, 2008
Global phosphoproteomic analysis of human skeletal muscle reveals a network of exercise-regulated kinases and AMPK substrates
NJ Hoffman, BL Parker, R Chaudhuri, KH Fisher-Wellman, M Kleinert, ...
Cell metabolism 22 (5), 922-935, 2015
Skeletal muscle and plasma lipidomic signatures of insulin resistance and overweight/obesity in humans
KT Tonks, ACF Coster, MJ Christopher, R Chaudhuri, A Xu, ...
Obesity 24 (4), 908-916, 2016
Severe acute respiratory syndrome coronavirus papain-like novel protease inhibitors: design, synthesis, protein− ligand X-ray structure and biological evaluation
AK Ghosh, J Takayama, KV Rao, K Ratia, R Chaudhuri, DC Mulhearn, ...
Journal of medicinal chemistry 53 (13), 4968-4979, 2010
Structure-based design, synthesis, and biological evaluation of a series of novel and reversible inhibitors for the severe acute respiratory syndrome− coronavirus papain-like …
AK Ghosh, J Takayama, Y Aubin, K Ratia, R Chaudhuri, Y Baez, ...
Journal of medicinal chemistry 52 (16), 5228-5240, 2009
Global phosphoproteomic mapping of early mitotic exit in human cells identifies novel substrate dephosphorylation motifs
RA McCloy, BL Parker, S Rogers, R Chaudhuri, V Gayevskiy, NJ Hoffman, ...
Molecular & Cellular Proteomics 14 (8), 2194-2212, 2015
Targeted phosphoproteomics of insulin signaling using data-independent acquisition mass spectrometry
BL Parker, G Yang, SJ Humphrey, R Chaudhuri, X Ma, S Peterman, ...
Science signaling 8 (380), rs6-rs6, 2015
Mitochondrial CoQ deficiency is a common driver of mitochondrial oxidants and insulin resistance
DJ Fazakerley, R Chaudhuri, P Yang, GJ Maghzal, KC Thomas, JR Krycer, ...
Elife 7, e32111, 2018
Proteomic analysis of GLUT4 storage vesicles reveals tumor suppressor candidate 5 (TUSC5) as a novel regulator of insulin action in adipocytes
DJ Fazakerley, S Naghiloo, R Chaudhuri, F Koumanov, JG Burchfield, ...
Journal of biological chemistry 290 (39), 23528-23542, 2015
Kinome screen identifies PFKFB3 and glucose metabolism as important regulators of the insulin/insulin-like growth factor (IGF)-1 signaling pathway
S Trefely, PS Khoo, JR Krycer, R Chaudhuri, DJ Fazakerley, BL Parker, ...
Journal of Biological Chemistry 290 (43), 25834-25846, 2015
mTORC2 and AMPK differentially regulate muscle triglyceride content via Perilipin 3
M Kleinert, BL Parker, R Chaudhuri, DJ Fazakerley, A Serup, KC Thomas, ...
Molecular metabolism 5 (8), 646-655, 2016
DOC2 isoforms play dual roles in insulin secretion and insulin-stimulated glucose uptake
J Li, J Cantley, JG Burchfield, CC Meoli, J Stöckli, PT Whitworth, H Pant, ...
Diabetologia 57 (10), 2173-2182, 2014
Reducing agents affect inhibitory activities of compounds: results from multiple drug targets
H Lee, J Torres, L Truong, R Chaudhuri, A Mittal, ME Johnson
Analytical biochemistry 423 (1), 46-53, 2012
Integrated expression analysis of muscle hypertrophy identifies Asb2 as a negative regulator of muscle mass
JR Davey, KI Watt, BL Parker, R Chaudhuri, JG Ryall, L Cunningham, ...
JCI insight 1 (5), 2016
Comparison of SARS and NL63 papain-like protease binding sites and binding site dynamics: inhibitor design implications
R Chaudhuri, S Tang, G Zhao, H Lu, DA Case, ME Johnson
Journal of molecular biology 414 (2), 272-288, 2011
Skeletal muscle extracellular matrix remodeling after short-term overfeeding in healthy humans
CS Tam, R Chaudhuri, AT Hutchison, D Samocha-Bonet, LK Heilbronn
Metabolism 67, 26-30, 2017
PhosphOrtholog: a web-based tool for cross-species mapping of orthologous protein post-translational modifications
R Chaudhuri, A Sadrieh, NJ Hoffman, BL Parker, SJ Humphrey, J Stöckli, ...
BMC genomics 16 (1), 1-14, 2015
Synergistic Inhibitor Binding to the Papain‐Like Protease of Human SARS Coronavirus: Mechanistic and Inhibitor Design Implications
H Lee, S Cao, KE Hevener, L Truong, JL Gatuz, K Patel, AK Ghosh, ...
ChemMedChem 8 (8), 1361, 2013
Metabolomic analysis of insulin resistance across different mouse strains and diets
J Stöckli, KH Fisher-Wellman, R Chaudhuri, XY Zeng, DJ Fazakerley, ...
Journal of Biological Chemistry 292 (47), 19135-19145, 2017
Application of drug-perturbed essential dynamics/molecular dynamics (ED/MD) to virtual screening and rational drug design
R Chaudhuri, O Carrillo, CA Laughton, M Orozco
Journal of chemical theory and computation 8 (7), 2204-2214, 2012
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