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Fabio Luciani
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Cited by
Year
Sequential bottlenecks drive viral evolution in early acute hepatitis C virus infection
RA Bull, F Luciani, K McElroy, S Gaudieri, ST Pham, A Chopra, ...
PLoS pathogens 7 (9), e1002243, 2011
2642011
Effects and interactions in an environmentally relevant mixture of pharmaceuticals
F Pomati, C Orlandi, M Clerici, F Luciani, E Zuccato
Toxicological Sciences 102 (1), 129-137, 2008
2462008
VDJdb: a curated database of T-cell receptor sequences with known antigen specificity
M Shugay, DV Bagaev, IV Zvyagin, RM Vroomans, JC Crawford, G Dolton, ...
Nucleic acids research 46 (D1), D419-D427, 2018
2292018
The epidemiological fitness cost of drug resistance in Mycobacterium tuberculosis
F Luciani, SA Sisson, H Jiang, AR Francis, MM Tanaka
Proceedings of the National Academy of Sciences 106 (34), 14711-14715, 2009
1882009
GemSIM: general, error-model based simulator of next-generation sequencing data
KE McElroy, F Luciani, T Thomas
BMC genomics 13 (1), 1-9, 2012
1822012
Using approximate Bayesian computation to estimate tuberculosis transmission parameters from genotype data
MM Tanaka, AR Francis, F Luciani, SA Sisson
Genetics 173 (3), 1511-1520, 2006
1642006
High-throughput targeted long-read single cell sequencing reveals the clonal and transcriptional landscape of lymphocytes
M Singh, G Al-Eryani, S Carswell, JM Ferguson, J Blackburn, K Barton, ...
Nature communications 10 (1), 1-13, 2019
1432019
VDJdb in 2019: database extension, new analysis infrastructure and a T-cell receptor motif compendium
DV Bagaev, RMA Vroomans, J Samir, U Stervbo, C Rius, G Dolton, ...
Nucleic Acids Research 48 (D1), D1057-D1062, 2020
1402020
Human CD8+ T cell cross-reactivity across influenza A, B and C viruses
M Koutsakos, PT Illing, THO Nguyen, NA Mifsud, JC Crawford, S Rizzetto, ...
Nature immunology 20 (5), 613-625, 2019
1402019
Contribution of intra-and interhost dynamics to norovirus evolution
RA Bull, JS Eden, F Luciani, K McElroy, WD Rawlinson, PA White
Journal of virology 86 (6), 3219-3229, 2012
1312012
Inhibitors of the hepatitis C virus polymerase; mode of action and resistance
AA Eltahla, F Luciani, PA White, AR Lloyd, RA Bull
Viruses 7 (10), 5206-5224, 2015
1092015
SARS-CoV-2 and COVID-19: A genetic, epidemiological, and evolutionary perspective
M Sironi, SE Hasnain, B Rosenthal, T Phan, F Luciani, MA Shaw, ...
Infection, Genetics and Evolution 84, 104384, 2020
1082020
A liver capsular network of monocyte-derived macrophages restricts hepatic dissemination of intraperitoneal bacteria by neutrophil recruitment
F Sierro, M Evrard, S Rizzetto, M Melino, AJ Mitchell, M Florido, L Beattie, ...
Immunity 47 (2), 374-388. e6, 2017
1062017
Epidemiological and clinical consequences of within-host evolution
S Alizon, F Luciani, RR Regoes
Trends in microbiology 19 (1), 24-32, 2011
1062011
Viral quasispecies assembly via maximal clique enumeration
A Töpfer, T Marschall, RA Bull, F Luciani, A Schönhuth, N Beerenwinkel
PLoS computational biology 10 (3), e1003515, 2014
1012014
Analytical validity of nanopore sequencing for rapid SARS-CoV-2 genome analysis
RA Bull, TN Adikari, JM Ferguson, JM Hammond, I Stevanovski, ...
Nature communications 11 (1), 1-8, 2020
1002020
Linking the T cell receptor to the single cell transcriptome in antigen‐specific human T cells
AA Eltahla, S Rizzetto, MR Pirozyan, BD Betz‐Stablein, V Venturi, ...
Immunology and cell biology 94 (6), 604-611, 2016
972016
Incidence of primary hepatitis C infection and risk factors for transmission in an Australian prisoner cohort
S Teutsch, F Luciani, N Scheuer, L McCredie, P Hosseiny, W Rawlinson, ...
BMC public health 10 (1), 1-9, 2010
962010
Deep sequencing of evolving pathogen populations: applications, errors, and bioinformatic solutions
K McElroy, T Thomas, F Luciani
Microbial informatics and experimentation 4 (1), 1-14, 2014
942014
Clonally diverse CD38+ HLA-DR+ CD8+ T cells persist during fatal H7N9 disease
Z Wang, L Zhu, THO Nguyen, Y Wan, S Sant, SM Quiñones-Parra, ...
Nature communications 9 (1), 1-12, 2018
842018
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