Joshua Wing Kei Ho
TitleCited byYear
Comparative analysis of metazoan chromatin organization
JWK Ho, YL Jung, T Liu, BH Alver, S Lee, K Ikegami, KA Sohn, A Minoda, ...
Nature 512 (7515), 449, 2014
2582014
ChIP-chip versus ChIP-seq: lessons for experimental design and data analysis
JWK Ho, E Bishop, PV Karchenko, N Nčgre, KP White, PJ Park
BMC genomics 12 (1), 134, 2011
1692011
Testing and validating machine learning classifiers by metamorphic testing
X Xie, JWK Ho, C Murphy, G Kaiser, B Xu, TY Chen
Journal of Systems and Software 84 (4), 544-558, 2011
1512011
An innovative approach for testing bioinformatics programs using metamorphic testing
TY Chen, JWK Ho, H Liu, X Xie
BMC bioinformatics 10 (1), 24, 2009
1312009
CIDR: Ultrafast and accurate clustering through imputation for single-cell RNA-seq data
P Lin, M Troup, JWK Ho
Genome biology 18 (1), 59, 2017
1272017
Differential variability analysis of gene expression and its application to human diseases
JWK Ho, M Stefani, CG Dos Remedios, MA Charleston
Bioinformatics 24 (13), i390-i398, 2008
1222008
Lung stem cell self-renewal relies on BMI1-dependent control of expression at imprinted loci
SJ Zacharek, CM Fillmore, AN Lau, DW Gludish, A Chou, JWK Ho, ...
Cell stem cell 9 (3), 272-281, 2011
1102011
Heart failure–associated changes in RNA splicing of sarcomere genes
SW Kong, YW Hu, JWK Ho, S Ikeda, S Polster, R John, JL Hall, E Bisping, ...
Circulation: Cardiovascular Genetics 3 (2), 138-146, 2010
972010
A Wnt-bmp feedback circuit controls intertissue signaling dynamics in tooth organogenesis
DJ O’Connell, JWK Ho, T Mammoto, A Turbe-Doan, JT O’Connell, ...
Sci. Signal. 5 (206), ra4-ra4, 2012
802012
iSyTE: integrated Systems Tool for Eye gene discovery
SA Lachke, JWK Ho, GV Kryukov, DJ O'Connell, A Aboukhalil, ML Bulyk, ...
Investigative ophthalmology & visual science 53 (3), 1617-1627, 2012
762012
Male-lineage transmission of an acquired metabolic phenotype induced by grand-paternal obesity
JE Cropley, SA Eaton, A Aiken, PE Young, E Giannoulatou, JWK Ho, ...
Molecular metabolism 5 (8), 699-708, 2016
732016
Application of metamorphic testing to supervised classifiers
X Xie, J Ho, C Murphy, G Kaiser, B Xu, TY Chen
2009 Ninth International Conference on Quality Software, 135-144, 2009
722009
Targeted next-generation sequencing identifies pathogenic variants in familial congenital heart disease
GM Blue, EP Kirk, E Giannoulatou, SL Dunwoodie, JWK Ho, DCK Hilton, ...
Journal of the American College of Cardiology 64 (23), 2498-2506, 2014
662014
NAD deficiency, congenital malformations, and niacin supplementation
H Shi, A Enriquez, M Rapadas, EMMA Martin, R Wang, J Moreau, CK Lim, ...
New England Journal of Medicine 377 (6), 544-552, 2017
632017
Geomi: Geometry for maximum insight
A Ahmed, T Dwyer, M Forster, X Fu, J Ho, SH Hong, D Koschützki, ...
International Symposium on Graph Drawing, 468-479, 2005
582005
A dynamic H3K27ac signature identifies VEGFA-stimulated endothelial enhancers and requires EP300 activity
B Zhang, DS Day, JW Ho, L Song, J Cao, D Christodoulou, JG Seidman, ...
Genome research 23 (6), 917-927, 2013
562013
SeqVis: visualization of compositional heterogeneity in large alignments of nucleotides
JWK Ho, CE Adams, JB Lew, TJ Matthews, CC Ng, A Shahabi-Sirjani, ...
Bioinformatics 22 (17), 2162-2163, 2006
552006
Impact of sequencing depth in ChIP-seq experiments
YL Jung, LJ Luquette, JWK Ho, F Ferrari, M Tolstorukov, A Minoda, ...
Nucleic acids research 42 (9), e74-e74, 2014
502014
Sequence-specific targeting of dosage compensation in Drosophila favors an active chromatin context
AA Alekseyenko, JWK Ho, S Peng, M Gelbart, MY Tolstorukov, ...
PLoS genetics 8 (4), 2012
442012
Gene-gene interaction filtering with ensemble of filters
P Yang, JWK Ho, YH Yang, BB Zhou
BMC bioinformatics 12 (1), S10, 2011
402011
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Articles 1–20