Mark A. Ragan

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Cheong Xin ChanAustralian Centre for Ecogenomics, Sch. Chemistry & Molecular Biosciences, University ofVerified email at uq.edu.au
Rob BeikoAssociate Professor of Computer Science, Dalhousie UniversityVerified email at dal.ca
Melissa J DavisJoint Head, Bioinformatics Division, The Walter and Eliza Hall Institute of Medical ResearchVerified email at wehi.edu.au
Robin R. GutellProfessor, Department of Integrative Biology, University of Texas at AustinVerified email at austin.utexas.edu
Sriganesh SrihariQIMR-Berghofer Medical Research InstituteVerified email at qimrberghofer.edu.au
David MillerProfessor, James Cook UniversityVerified email at jcu.edu.au
Terry GaasterlandUniversity of California San DiegoVerified email at ucsd.edu
Chanyarat Paungfoo-LonhienneThe University of QueenslandVerified email at uq.edu.au
Raúl A. González-PechEberly Postdoctoral Research Fellow at Pennsylvania State UniversityVerified email at psu.edu
Christoph W. SensenDG & CEO, HCEMM Kft.Verified email at hcemm.eu
Susanne.Schmidt@uq.edu.auProfessor, School of Agriculture and Food Sciences, The University of Queensland, AustraliaVerified email at uq.edu.au
Aaron DarlingIllumina Australia; Professor @ University of Technology SydneyVerified email at illumina.com
Philip HugenholtzAustralian Centre for Ecogenomics, SCMB, The University of QueenslandVerified email at uq.edu.au
W. Ford DoolittleDalhousie UniversityVerified email at dal.ca
Yun Kit YeohDepartment of Microbiology, The Chinese University of Hong KongVerified email at uqconnect.edu.au
Guillaume BernardPostdoctoral Fellow, Institut de Biologie de L’Ecole Normale Supérieure (IBENS)Verified email at bio.ens.psl.eu
Elizabeth SkippingtonScientist, Bioinformatics and Computational Biology, GenentechVerified email at gene.com
Karen R. LipsUniversity of Maryland, Southern Illinois University, St. Lawrence UniversityVerified email at umd.edu
Alex HyattFellow CSIROVerified email at csiro.au
Rick SpeareJames Cook UniversityVerified email at jcu.edu.au

Mark A. Ragan

Institute for Molecular Bioscience, The University of Queensland

Verified email at uq.edu.au - Homepage

Computational genomics bioinformatics evolutionary biology systems biology marine biology


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Chytridiomycosis causes amphibian mortality associated with population declines in the rain forests of Australia and Central America L Berger, R Speare, P Daszak, DE Green, AA Cunningham, CL Goggin, ... Proceedings of the National Academy of Sciences 95 (15), 9031-9036, 1998	2480	1998
The complete genome of the crenarchaeon Sulfolobus solfataricus P2 Q She, RK Singh, F Confalonieri, Y Zivanovic, G Allard, MJ Awayez, ... Proceedings of the National Academy of Sciences 98 (14), 7835-7840, 2001	933	2001
Phlorotannins, brown algal polyphenols MA Ragan, KW Glombitza Progress in Phycological Research 4, 129-241, 1986	814	1986
Identification of domoic acid, a neuroexcitatory amino acid, in toxic mussels from eastern Prince Edward Island JLC Wright, RK Boyd, ASW Freitas, M Falk, RA Foxall, WD Jamieson, ... Canadian Journal of Chemistry 67 (3), 481-490, 1989	560	1989
Highways of gene sharing in prokaryotes RG Beiko, TJ Harlow, MA Ragan Proceedings of the National Academy of Sciences 102 (40), 14332-14337, 2005	557	2005
Phylogenetic inference based on matrix representation of trees MA Ragan Molecular phylogenetics and evolution 1 (1), 53-58, 1992	539	1992
Visualization of image data from cells to organisms T Walter, DW Shattuck, R Baldock, ME Bastin, AE Carpenter, S Duce, ... Nature methods 7 (3), S26-S41, 2010	292	2010
A molecular phylogeny of the marine red algae (Rhodophyta) based on the nuclear small-subunit rRNA gene MA Ragan, CJ Bird, EL RicE, RR Gutell, CA Murphy, RK Singh Proceedings of the National Academy of Sciences 91 (15), 7276-7280, 1994	237	1994
Dynamics of genome rearrangement in bacterial populations AE Darling, I Miklós, MA Ragan PLoS Genetics 4 (7), e1000128, 2008	235	2008
Detection of lateral gene transfer among microbial genomes MA Ragan Current opinion in genetics & development 11 (6), 620-626, 2001	219	2001
On surrogate methods for detecting lateral gene transfer MA Ragan FEMS Microbiology letters 201 (2), 187-191, 2001	216	2001
A novel clade of protistan parasites near the animal-fungal divergence MA Ragan, CL Goggin, RJ Cawthorn, L Cerenius, AV Jamieson, ... Proceedings of the National Academy of Sciences 93 (21), 11907-11912, 1996	208	1996
Evolution of gene function and regulatory control after whole-genome duplication: comparative analyses in vertebrates KS Kassahn, VT Dang, SJ Wilkins, AC Perkins, MA Ragan Genome research 19 (8), 1404-1418, 2009	198	2009
Lateral genetic transfer and the construction of genetic exchange communities E Skippington, MA Ragan FEMS microbiology reviews 35 (5), 707-735, 2011	184	2011
A biochemical phylogeny of the protists MA Ragan, DJ Chapman Elsevier (originally published by Academic Press), 1978	180*	1978
The mammalian PYHIN gene family: phylogeny, evolution and expression JA Cridland, EZ Curley, MN Wykes, K Schroder, MJ Sweet, TL Roberts, ... BMC evolutionary biology 12 (1), 1-17, 2012	173	2012
Microbial genescapes: phyletic and functional patterns of ORF distribution among prokaryotes T GAASTERLAND, MA RAGAN Microbial & comparative genomics 3 (4), 199-217, 1998	171	1998
Next-generation phylogenomics CX Chan, MA Ragan Biology direct 8 (1), 1-6, 2013	169	2013
Supervised, semi-supervised and unsupervised inference of gene regulatory networks SR Maetschke, PB Madhamshettiwar, MJ Davis, MA Ragan Briefings in Bioinformatics 15, 195-211, 2013	168	2013
Evolutionary conservation of a core root microbiome across plant phyla along a tropical soil chronosequence YK Yeoh, PG Dennis, C Paungfoo-Lonhienne, L Weber, R Brackin, ... Nature communications 8 (1), 1-9, 2017	164	2017

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