Conrad Stack
Conrad Stack
Mars, Incorporated
Verified email at effem.com - Homepage
TitleCited byYear
The genome sequence of the most widely cultivated cacao type and its use to identify candidate genes regulating pod color
JC Motamayor, K Mockaitis, J Schmutz, N Haiminen, D Livingstone III, ...
Genome biology 14 (6), r53, 2013
1572013
Protocols for sampling viral sequences to study epidemic dynamics
JC Stack, JD Welch, MJ Ferrari, BU Shapiro, BT Grenfell
Journal of the Royal Society Interface 7 (48), 1119-1127, 2010
422010
Inferring the inter-host transmission of influenza A virus using patterns of intra-host genetic variation
JC Stack, PR Murcia, BT Grenfell, JLN Wood, EC Holmes
Proceedings of the Royal Society B: Biological Sciences 280 (1750), 20122173, 2013
352013
Evolution of equine influenza virus in vaccinated horses
PR Murcia, GJ Baillie, JC Stack, C Jervis, D Elton, JA Mumford, J Daly, ...
Journal of virology 87 (8), 4768-4771, 2013
302013
Deep sequencing reveals persistence of intra-and inter-host genetic diversity in natural and greenhouse populations of zucchini yellow mosaic virus
HE Simmons, JP Dunham, JC Stack, BJA Dickins, I Pagan, EC Holmes, ...
Journal of General Virology 93 (8), 1831-1840, 2012
292012
Inferring population-level contact heterogeneity from common epidemic data
JC Stack, S Bansal, VSA Kumar, B Grenfell
Journal of the Royal Society Interface 10 (78), 20120578, 2013
212013
Making a chocolate chip: development and evaluation of a 6K SNP array for Theobroma cacao
D Livingstone, S Royaert, C Stack, K Mockaitis, G May, A Farmer, C Saski, ...
DNA research 22 (4), 279-291, 2015
172015
RBrownie: an R package for testing hypotheses about rates of evolutionary change
JC Stack, LJ Harmon, B O'Meara
Methods in Ecology and Evolution 2 (6), 660-662, 2011
112011
Assessing microsatellite linkage disequilibrium in wild, cultivated, and mapping populations of Theobroma cacao L. and its impact on association mapping
JC Stack, S Royaert, O Gutiérrez, C Nagai, ISA Holanda, R Schnell, ...
Tree genetics & genomes 11 (2), 19, 2015
82015
A larger chocolate chip—development of a 15k Theobroma cacao L. SNP array to create high-density linkage maps
D Livingstone III, C Stack, GM Mustiga, DC Rodezno, C Suarez, F Amores, ...
Frontiers in plant science 8, 2008, 2017
62017
Genetic parameters and the impact of off-types for Theobroma cacao L. in a breeding program in Brazil
A DuVal, SA Gezan, G Mustiga, C Stack, JP Marelli, J Chaparro, ...
Frontiers in plant science 8, 2059, 2017
62017
Population genomic analyses of the chocolate tree, Theobroma cacao L., provide insights into its domestication process
OE Cornejo, MC Yee, V Dominguez, M Andrews, A Sockell, E Strandberg, ...
Communications Biology 1 (1), 167, 2018
52018
Prediction of cacao (Theobroma cacao) resistance to Moniliophthora spp. diseases via genome-wide association analysis and genomic selection
MS McElroy, AJR Navarro, G Mustiga, C Stack, S Gezan, G Peña, ...
Frontiers in plant science 9, 343, 2018
42018
Low-cost assembly of a cacao crop genome is able to resolve complex heterozygous bubbles
J Morrissey, JC Stack, R Valls, JC Motamayor
Horticulture research 6 (1), 44, 2019
2019
Package ‘phyext’
JC Stack, MJC Stack
2015
Assessing the phylodynamics of RNA viruses which cause acute disease
JC Stack
2012
Inferring population-level contact heterogeneity from common
JC Stack, S Bansal, VSA Kumar, B Grenfell
2012
Inferring the inter-host transmission of influenza A virus using
JC Stack, PR Murcia, BT Grenfell, JLN Wood, EC Holmes
2012
Package ‘RBrownie’
JC Stack, B O’Meara, L Harmon, MJC Stack
2010
Detection of the pandemic H1N1/2009 influenza A virus by a highly sensitive quantitative real-time reverse-transcription polymerase chain reaction assay.
K Dhama, AK Verma, S Rajagunalan, R Deb, K Karthik, S Kapoor, ...
Pakistan Journal of Biological Sciences 15 (21), 16-23, 2008
2008
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Articles 1–20