Conrad Stack
Conrad Stack
Mars, Incorporated
Verified email at effem.com - Homepage
Title
Cited by
Cited by
Year
The genome sequence of the most widely cultivated cacao type and its use to identify candidate genes regulating pod color
JC Motamayor, K Mockaitis, J Schmutz, N Haiminen, D Livingstone III, ...
Genome biology 14 (6), 1-25, 2013
1872013
Protocols for sampling viral sequences to study epidemic dynamics
JC Stack, JD Welch, MJ Ferrari, BU Shapiro, BT Grenfell
Journal of the Royal Society Interface 7 (48), 1119-1127, 2010
522010
Inferring the inter-host transmission of influenza A virus using patterns of intra-host genetic variation
JC Stack, PR Murcia, BT Grenfell, JLN Wood, EC Holmes
Proceedings of the Royal Society B: Biological Sciences 280 (1750), 20122173, 2013
392013
Evolution of equine influenza virus in vaccinated horses
PR Murcia, GJ Baillie, JC Stack, C Jervis, D Elton, JA Mumford, J Daly, ...
Journal of virology 87 (8), 4768-4771, 2013
372013
Deep sequencing reveals persistence of intra-and inter-host genetic diversity in natural and greenhouse populations of zucchini yellow mosaic virus
HE Simmons, JP Dunham, JC Stack, BJA Dickins, I Pagan, EC Holmes, ...
Journal of general virology 93 (8), 1831-1840, 2012
362012
Inferring population-level contact heterogeneity from common epidemic data
JC Stack, S Bansal, VSA Kumar, B Grenfell
Journal of the Royal Society Interface 10 (78), 20120578, 2013
222013
Population genomic analyses of the chocolate tree, Theobroma cacao L., provide insights into its domestication process
OE Cornejo, MC Yee, V Dominguez, M Andrews, A Sockell, E Strandberg, ...
Communications biology 1 (1), 1-12, 2018
212018
Making a chocolate chip: development and evaluation of a 6K SNP array for Theobroma cacao
D Livingstone, S Royaert, C Stack, K Mockaitis, G May, A Farmer, C Saski, ...
DNA research 22 (4), 279-291, 2015
202015
Genetic parameters and the impact of off-types for Theobroma cacao L. in a breeding program in Brazil
A DuVal, SA Gezan, G Mustiga, C Stack, JP Marelli, J Chaparro, ...
Frontiers in plant science 8, 2059, 2017
112017
Assessing microsatellite linkage disequilibrium in wild, cultivated, and mapping populations of Theobroma cacao L. and its impact on association mapping
JC Stack, S Royaert, O Gutiérrez, C Nagai, ISA Holanda, R Schnell, ...
Tree Genetics & Genomes 11 (2), 19, 2015
112015
RBrownie: an R package for testing hypotheses about rates of evolutionary change
JC Stack, LJ Harmon, B O'Meara
Methods in Ecology and Evolution 2 (6), 660-662, 2011
112011
Prediction of cacao (Theobroma cacao) resistance to Moniliophthora spp. diseases via genome-wide association analysis and genomic selection
MS McElroy, AJR Navarro, G Mustiga, C Stack, S Gezan, G Peña, ...
Frontiers in plant science 9, 343, 2018
102018
A larger chocolate chip—development of a 15K Theobroma cacao L. SNP array to create high-density linkage maps
D Livingstone III, C Stack, GM Mustiga, DC Rodezno, C Suarez, F Amores, ...
Frontiers in plant science 8, 2008, 2017
9*2017
Detection of the pandemic H1N1/2009 influenza A virus by a highly sensitive quantitative real-time reverse-transcription polymerase chain reaction assay
Z Yang, G Mao, Y Liu, YC Chen, C Liu, J Luo, X Li, K Zen, Y Pang, J Wu, ...
Virologica Sinica 28 (1), 24-35, 2013
52013
Low-cost assembly of a cacao crop genome is able to resolve complex heterozygous bubbles
J Morrissey, JC Stack, R Valls, JC Motamayor
Horticulture research 6 (1), 1-13, 2019
42019
Identification of climate and genetic factors that control fat content and fatty acid composition of Theobroma cacao L. beans
GM Mustiga, J Morrissey, JC Stack, A DuVal, S Royaert, J Jansen, ...
Frontiers in plant science 10, 1159, 2019
12019
A Larger Chocolate Chip-Development of a 15K Theobroma cacao L. SNP Array to Create High-Density Linkage Maps (vol 8, 2008, 2017)
D Livingstone III, C Stack, GM Mustiga, DC Rodezno, C Suarez, F Amores, ...
FRONTIERS IN PLANT SCIENCE 9, 2018
2018
Validation of Low Cost, Long Read Sequencing for Crop Pangenomics
J Morrissey, JC Stack, R Valls, JCM Arias
Plant and Animal Genome XXVI Conference (January 13-17, 2018), 2018
2018
Package ‘phyext’
JC Stack, MJC Stack
2015
Assessing the phylodynamics of RNA viruses which cause acute disease
JC Stack
2012
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Articles 1–20