Harriet Dashnow
Harriet Dashnow
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Cited by
SRST2: Rapid genomic surveillance for public health and hospital microbiology labs
M Inouye, H Dashnow, LA Raven, MB Schultz, BJ Pope, T Tomita, J Zobel, ...
Genome medicine 6 (11), 1-16, 2014
STRetch: detecting and discovering pathogenic short tandem repeat expansions
H Dashnow, M Lek, B Phipson, A Halman, S Sadedin, A Lonsdale, ...
Genome biology 19 (1), 1-13, 2018
Cpipe: a shared variant detection pipeline designed for diagnostic settings
SP Sadedin, H Dashnow, PA James, M Bahlo, DC Bauer, A Lonie, ...
Genome medicine 7, 1-10, 2015
Effective variant filtering and expected candidate variant yield in studies of rare human disease
BS Pedersen, JM Brown, H Dashnow, AD Wallace, M Velinder, ...
NPJ Genomic Medicine 6 (1), 60, 2021
A clinically driven variant prioritization framework outperforms purely computational approaches for the diagnostic analysis of singleton WES data
Z Stark, H Dashnow, S Lunke, TY Tan, A Yeung, S Sadedin, N Thorne, ...
European Journal of Human Genetics 25 (11), 1268-1272, 2017
Ten simple rules for writing a PLOS ten simple rules article
H Dashnow, A Lonsdale, PE Bourne
PLoS Computational Biology 10 (10), e1003858, 2014
Elegant SciPy: The Art of Scientific Python
J Nunez-Iglesias, S Van der Walt, H Dashnow
" O'Reilly Media, Inc.", 2017
Bionitio: demonstrating and facilitating best practices for bioinformatics command-line software. GigaScience 8, giz109 (Sept. 2019)
P Georgeson, A Syme, C Sloggett, J Chung, H Dashnow, M Milton, ...
STRling: a k-mer counting approach that detects short tandem repeat expansions at known and novel loci
H Dashnow, BS Pedersen, L Hiatt, J Brown, SJ Beecroft, G Ravenscroft, ...
Genome Biology 23 (1), 1-20, 2022
Ten simple rules for a bioinformatics journal club
A Lonsdale, J Sietsma Penington, T Rice, M Walker, H Dashnow
PLoS Computational Biology 12 (1), e1004526, 2016
Genotyping microsatellites in next-generation sequencing data
H Dashnow, S Tan, D Das, S Easteal, A Oshlack
Bmc Bioinformatics 16 (2), 1-2, 2015
Development of transgenic mice containing an introduced stop codon on the human methylmalonyl-CoA mutase locus
NE Buck, H Dashnow, JJ Pitt, LR Wood, HL Peters
Public Library of Science 7 (9), e44974, 2012
Chronic Lactation Insufficiency Is a Public Health Issue: Commentary on “We Need Patient-Centered Research in Breastfeeding Medicine” by Stuebe. Breastfeed Med 2021; 16: 349–350.
H Shere, L Weijer, H Dashnow, LE Moreno, S Foxworthy Scott, H Baker
Breastfeeding Medicine 16 (12), 933-934, 2021
Resolving the unsolved: Comprehensive assessment of tandem repeats at scale
E Dolzhenko, A English, H Dashnow, G De Sena Brandine, T Mokveld, ...
bioRxiv, 2023.05. 12.540470, 2023
Pooled-parent exome sequencing to prioritise de novo variants in genetic disease
H Dashnow, KM Bell, Z Stark, TY Tan, SM White, A Oshlack
bioRxiv, 601740, 2019
1: RNA-Seq reads to counts
M Doyle, B Phipson, H Dashnow
Galaxy Training Network, 2019
RNA-seq analysis in R
B Phipson, A Trigos, M Ritchie, S Su, M Doyle, H Dashnow, C Law
Differential Expression Analysis, 2016
2: RNA-seq counts to genes
M Doyle, B Phipson, J Maksimovic, A Trigos, M Ritchie, H Dashnow, S Su, ...
Galaxy Training Network, 2019
Data Interlocking: Coupling analytics to the data
Y Kowsar, H Dashnow, A Lonie
2014 IEEE/ACM 7th International Conference on Utility and Cloud Computing …, 2014
P445: Short tandem repeat expansions in the diagnosis of rare Mendelian diseases by whole genome sequencing
H Dashnow, B Pedersen, L Hiatt, A Quinlan
Genetics in Medicine Open 1 (1), 2023
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Articles 1–20