Michael B Clark
Michael B Clark
Senior Research Fellow, University of Melbourne
Verified email at - Homepage
Cited by
Cited by
lncRNAdb: a reference database for long noncoding RNAs
PP Amaral, MB Clark, DK Gascoigne, ME Dinger, JS Mattick
Nucleic acids research 39 (suppl_1), D146-D151, 2011
Genome-wide analysis of long noncoding RNA stability
MB Clark, RL Johnston, M Inostroza-Ponta, AH Fox, E Fortini, P Moscato, ...
Genome research 22 (5), 885-898, 2012
lncRNAdb v2. 0: expanding the reference database for functional long noncoding RNAs
XC Quek, DW Thomson, JLV Maag, N Bartonicek, B Signal, MB Clark, ...
Nucleic acids research 43 (D1), D168-D173, 2015
The reality of pervasive transcription
MB Clark, PP Amaral, FJ Schlesinger, ME Dinger, RJ Taft, JL Rinn, ...
PLoS Biol 9 (7), e1000625, 2011
Long noncoding RNAs in cell biology
MB Clark, JS Mattick
Seminars in cell & developmental biology 22 (4), 366-376, 2011
SNORD-host RNA Zfas1 is a regulator of mammary development and a potential marker for breast cancer
ME Askarian-Amiri, J Crawford, JD French, CE Smart, MA Smith, MB Clark, ...
Rna 17 (5), 878-891, 2011
Genome-wide discovery of human splicing branchpoints
TR Mercer, MB Clark, SB Andersen, ME Brunck, W Haerty, J Crawford, ...
Genome research 25 (2), 290-303, 2015
Targeted sequencing for gene discovery and quantification using RNA CaptureSeq
TR Mercer, MB Clark, J Crawford, ME Brunck, DJ Gerhardt, RJ Taft, ...
Nature protocols 9 (5), 989-1009, 2014
RNAcentral: a comprehensive database of non-coding RNA sequences
RNAcentral Consortium
Nucleic acids research 45 (Database issue), D128, 2017
Quantitative gene profiling of long noncoding RNAs with targeted RNA sequencing
MB Clark, TR Mercer, G Bussotti, T Leonardi, KR Haynes, J Crawford, ...
Nature methods 12 (4), 339-342, 2015
DNase I–hypersensitive exons colocalize with promoters and distal regulatory elements
TR Mercer, SL Edwards, MB Clark, SJ Neph, H Wang, AB Stergachis, ...
Nature genetics 45 (8), 852-859, 2013
Universal alternative splicing of noncoding exons
IW Deveson, ME Brunck, J Blackburn, E Tseng, T Hon, TA Clark, MB Clark, ...
Cell systems 6 (2), 245-255. e5, 2018
Long-read sequencing reveals the complex splicing profile of the psychiatric risk gene CACNA1C in human brain
MB Clark, T Wrzesinski, AB Garcia, NAL Hall, JE Kleinman, T Hyde, ...
Molecular psychiatry, 2019
Mammalian gene PEG10 expresses two reading frames by high efficiency–1 frameshifting in embryonic-associated tissues
MB Clark, M Jänicke, U Gottesbühren, T Kleffmann, M Legge, ES Poole, ...
Journal of Biological Chemistry 282 (52), 37359-37369, 2007
RNAcentral: an international database of ncRNA sequences
RNAcentral Consortium
Nucleic acids research 43 (Database issue), D123, 2015
The dark matter rises: the expanding world of regulatory RNAs
MB Clark, A Choudhary, MA Smith, RJ Taft, JS Mattick
Essays in biochemistry 54, 1-16, 2013
Comprehensive characterization of single-cell full-length isoforms in human and mouse with long-read sequencing
L Tian, JS Jabbari, R Thijssen, Q Gouil, SL Amarasinghe, O Voogd, ...
Genome Biology 22 (1), 1-24, 2021
Pinstripe: a suite of programs for integrating transcriptomic and proteomic datasets identifies novel proteins and improves differentiation of protein-coding and non-coding genes
DK Gascoigne, SW Cheetham, PB Cattenoz, MB Clark, PP Amaral, ...
Bioinformatics 28 (23), 3042-3050, 2012
Long noncoding RNAs CUPID1 and CUPID2 mediate breast cancer risk at 11q13 by modulating the response to DNA damage
JA Betts, MM Marjaneh, F Al-Ejeh, YC Lim, W Shi, H Sivakumaran, ...
The American Journal of Human Genetics 101 (2), 255-266, 2017
Intergenic disease-associated regions are abundant in novel transcripts
N Bartonicek, MB Clark, XC Quek, JR Torpy, AL Pritchard, JLV Maag, ...
Genome biology 18 (1), 241, 2017
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