| Protocol for micro-purification, enrichment, pre-fractionation and storage of peptides for proteomics using StageTips J Rappsilber, M Mann, Y Ishihama Nature protocols 2 (8), 1896, 2007 | 2065 | 2007 |
| Exponentially modified protein abundance index (emPAI) for estimation of absolute protein amount in proteomics by the number of sequenced peptides per protein Y Ishihama, Y Oda, T Tabata, T Sato, T Nagasu, J Rappsilber, M Mann Molecular & Cellular Proteomics 4 (9), 1265-1272, 2005 | 1804 | 2005 |
| Stop and go extraction tips for matrix-assisted laser desorption/ionization, nanoelectrospray, and LC/MS sample pretreatment in proteomics J Rappsilber, Y Ishihama, M Mann Analytical chemistry 75 (3), 663-670, 2003 | 1738 | 2003 |
| miRNPs: a novel class of ribonucleoproteins containing numerous microRNAs Z Mourelatos, J Dostie, S Paushkin, A Sharma, B Charroux, L Abel, ... Genes & development 16 (6), 720-728, 2002 | 1383 | 2002 |
| TET1 and hydroxymethylcytosine in transcription and DNA methylation fidelity K Williams, J Christensen, MT Pedersen, JV Johansen, PAC Cloos, ... Nature 473 (7347), 343, 2011 | 1146* | 2011 |
| UTX and JMJD3 are histone H3K27 demethylases involved in HOX gene regulation and development K Agger, PAC Cloos, J Christensen, D Pasini, S Rose, J Rappsilber, ... Nature 449 (7163), 731, 2007 | 1076 | 2007 |
| Large-scale proteomic analysis of the human spliceosome J Rappsilber, U Ryder, AI Lamond, M Mann Genome research 12 (8), 1231-1245, 2002 | 988 | 2002 |
| The putative oncogene GASC1 demethylates tri-and dimethylated lysine 9 on histone H3 PAC Cloos, J Christensen, K Agger, A Maiolica, J Rappsilber, T Antal, ... Nature 442 (7100), 307, 2006 | 743 | 2006 |
| A model for transmission of the H3K27me3 epigenetic mark KH Hansen, AP Bracken, D Pasini, N Dietrich, SS Gehani, A Monrad, ... Nature cell biology 10 (11), 1291, 2008 | 599 | 2008 |
| Mass spectrometry and EST-database searching allows characterization of the multi-protein spliceosome complex G Neubauer, A King, J Rappsilber, C Calvio, M Watson, P Ajuh, ... Nature genetics 20 (1), 46, 1998 | 572 | 1998 |
| RBP2 belongs to a family of demethylases, specific for tri-and dimethylated lysine 4 on histone 3 J Christensen, K Agger, PAC Cloos, D Pasini, S Rose, L Sennels, ... Cell 128 (6), 1063-1076, 2007 | 495 | 2007 |
| JARID2 regulates binding of the Polycomb repressive complex 2 to target genes in ES cells D Pasini, PAC Cloos, J Walfridsson, L Olsson, JP Bukowski, JV Johansen, ... Nature 464 (7286), 306, 2010 | 480 | 2010 |
| Implications for kinetochore-microtubule attachment from the structure of an engineered Ndc80 complex C Ciferri, S Pasqualato, E Screpanti, G Varetti, S Santaguida, G Dos Reis, ... Cell 133 (3), 427-439, 2008 | 467 | 2008 |
| Protein abundance profiling of the Escherichia coli cytosol Y Ishihama, T Schmidt, J Rappsilber, M Mann, FU Hartl, MJ Kerner, ... BMC genomics 9 (1), 102, 2008 | 439 | 2008 |
| Histone methylation-dependent mechanisms impose ligand dependency for gene activation by nuclear receptors I Garcia-Bassets, YS Kwon, F Telese, GG Prefontaine, KR Hutt, CS Cheng, ... Cell 128 (3), 505-518, 2007 | 437 | 2007 |
| Pre-mRNA splicing and mRNA export linked by direct interactions between UAP56 and Aly MJ Luo, Z Zhou, K Magni, C Christoforides, J Rappsilber, M Mann, ... Nature 413 (6856), 644, 2001 | 392 | 2001 |
| The methylosome, a 20S complex containing JBP1 and pICln, produces dimethylarginine-modified Sm proteins WJ Friesen, S Paushkin, A Wyce, S Massenet, GS Pesiridis, G Van Duyne, ... Molecular and cellular biology 21 (24), 8289-8300, 2001 | 389 | 2001 |
| Architecture of the RNA polymerase II–TFIIF complex revealed by cross‐linking and mass spectrometry ZA Chen, A Jawhari, L Fischer, C Buchen, S Tahir, T Kamenski, ... The EMBO journal 29 (4), 717-726, 2010 | 374 | 2010 |
| The beginning of a beautiful friendship: cross-linking/mass spectrometry and modelling of proteins and multi-protein complexes J Rappsilber Journal of structural biology 173 (3), 530-540, 2011 | 362 | 2011 |
| BoxPlotR: a web tool for generation of box plots M Spitzer, J Wildenhain, J Rappsilber, M Tyers Nature methods 11 (2), 121, 2014 | 351 | 2014 |
Matthias MannMax Planck Institute of Biochemistry, Munich and CPR, University of CopenhagenVerified email at biochem.mpg.de
