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Eric K Wafula
Eric K Wafula
Bioinformatics Scientist, Philadelphia Children's Hospital
Verified email at chop.edu
Title
Cited by
Cited by
Year
Phylotranscriptomic analysis of the origin and early diversification of land plants
NJ Wickett, S Mirarab, N Nguyen, T Warnow, E Carpenter, N Matasci, ...
Proceedings of the National Academy of Sciences 111 (45), E4859-E4868, 2014
9982014
One thousand plant transcriptomes and the phylogenomics of green plants
Nature 574 (7780), 679-685, 2019
7052019
The Amborella Genome and the Evolution of Flowering Plants
Amborella Genome Project, VA Albert, WB Barbazuk, CW dePamphilis, ...
Science 342 (6165), 1241089, 2013
5712013
Data access for the 1,000 Plants (1KP) project
N Matasci, LH Hung, Z Yan, EJ Carpenter, NJ Wickett, S Mirarab, ...
Gigascience 3 (1), 2047-217X-3-17, 2014
5162014
The butterfly plant arms-race escalated by gene and genome duplications
PP Edger, HM Heidel-Fischer, M Bekaert, J Rota, G Glöckner, AE Platts, ...
Proceedings of the National Academy of Sciences 112 (27), 8362-8366, 2015
3782015
A genome triplication associated with early diversification of the core eudicots
Y Jiao, J Leebens-Mack, S Ayyampalayam, JE Bowers, MR McKain, ...
Genome biology 13 (1), 1-14, 2012
3272012
Genome of the long-living sacred lotus (Nelumbo nucifera Gaertn.)
R Ming, R VanBuren, Y Liu, M Yang, Y Han, LT Li, Q Zhang, MJ Kim, ...
Genome biology 14 (5), 1-11, 2013
3242013
Fern genomes elucidate land plant evolution and cyanobacterial symbioses
FW Li, P Brouwer, L Carretero-Paulet, S Cheng, J De Vries, PM Delaux, ...
Nature plants 4 (7), 460-472, 2018
2582018
Genomic-scale exchange of mRNA between a parasitic plant and its hosts
G Kim, ML LeBlanc, EK Wafula, CW DePamphilis, JH Westwood
Science 345 (6198), 808-811, 2014
2402014
MicroRNAs from the parasitic plant Cuscuta campestris target host messenger RNAs
S Shahid, G Kim, NR Johnson, E Wafula, F Wang, C Coruh, ...
Nature 553 (7686), 82-85, 2018
2242018
The parasitic plant genome project: new tools for understanding the biology of Orobanche and Striga
JH Westwood, CW Depamphilis, M Das, M Fernández-Aparicio, ...
Weed Science 60 (2), 295-306, 2012
1282012
Comparative transcriptome analyses reveal core parasitism genes and suggest gene duplication and repurposing as sources of structural novelty
Z Yang, EK Wafula, LA Honaas, H Zhang, M Das, M Fernandez-Aparicio, ...
Molecular biology and evolution 32 (3), 767-790, 2015
1142015
Selecting Superior De Novo Transcriptome Assemblies: Lessons Learned by Leveraging the Best Plant Genome
LA Honaas, EK Wafula, NJ Wickett, JP Der, Y Zhang, PP Edger, ...
PloS one 11 (1), e0146062, 2016
1042016
Local Auxin Biosynthesis Mediated by a YUCCA Flavin Monooxygenase Regulates Haustorium Development in the Parasitic Plant Phtheirospermum japonicum
JK Ishida, T Wakatake, S Yoshida, Y Takebayashi, H Kasahara, E Wafula, ...
The Plant Cell 28 (8), 1795-1814, 2016
882016
Single-copy nuclear genes place haustorial Hydnoraceae within Piperales and reveal a Cretaceous origin of multiple parasitic angiosperm lineages
J Naumann, K Salomo, JP Der, EK Wafula, JF Bolin, E Maass, L Frenzke, ...
PLoS One 8 (11), e79204, 2013
862013
Genome sequence of Striga asiatica provides insight into the evolution of plant parasitism
S Yoshida, S Kim, EK Wafula, J Tanskanen, YM Kim, L Honaas, Z Yang, ...
Current Biology 29 (18), 3041-3052. e4, 2019
812019
Transcriptomes of the parasitic plant family Orobanchaceae reveal surprising conservation of chlorophyll synthesis
NJ Wickett, LA Honaas, EK Wafula, M Das, K Huang, B Wu, L Landherr, ...
Current Biology 21 (24), 2098-2104, 2011
782011
Horizontal gene transfer is more frequent with increased heterotrophy and contributes to parasite adaptation
Z Yang, Y Zhang, EK Wafula, LA Honaas, PE Ralph, S Jones, CR Clarke, ...
Proceedings of the National Academy of Sciences 113 (45), E7010-E7019, 2016
762016
Detecting and Characterizing the Highly Divergent Plastid Genome of the Nonphotosynthetic Parasitic Plant Hydnora visseri (Hydnoraceae)
J Naumann, JP Der, EK Wafula, SS Jones, ST Wagner, LA Honaas, ...
Genome Biology and Evolution 8 (2), 345-363, 2016
692016
Functional genomics of a generalist parasitic plant: laser microdissection of host-parasite interface reveals host-specific patterns of parasite gene expression
LA Honaas, EK Wafula, Z Yang, JP Der, NJ Wickett, NS Altman, CG Taylor, ...
BMC plant biology 13 (1), 1-20, 2013
662013
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