Assessment of network module identification across complex diseases S Choobdar, ME Ahsen, J Crawford, M Tomasoni, T Fang, D Lamparter, ... Nature methods 16 (9), 843-852, 2019 | 244 | 2019 |
Integrate multi-omics data with biological interaction networks using Multi-view Factorization AutoEncoder (MAE) T Ma, A Zhang BMC genomics 20 (Suppl 11), 944, 2019 | 69 | 2019 |
Affinitynet: semi-supervised few-shot learning for disease type prediction T Ma, A Zhang Proceedings of the AAAI conference on artificial intelligence 33 (01), 1069-1076, 2019 | 58 | 2019 |
Integrate multi-omic data using affinity network fusion (ANF) for cancer patient clustering T Ma, A Zhang 2017 IEEE International Conference on Bioinformatics and Biomedicine (BIBM …, 2017 | 58 | 2017 |
Affinity network fusion and semi-supervised learning for cancer patient clustering T Ma, A Zhang Methods 145, 16-24, 2018 | 35 | 2018 |
Multi-view factorization autoencoder with network constraints for multi-omic integrative analysis T Ma, A Zhang 2018 IEEE International Conference on Bioinformatics and Biomedicine (BIBM …, 2018 | 30 | 2018 |
Dendritic cell-based vaccines against cancer: challenges, advances and future opportunities C Fu, T Ma, L Zhou, QS Mi, A Jiang Immunological investigations 51 (8), 2133-2158, 2022 | 25 | 2022 |
Omics informatics: from scattered individual software tools to integrated workflow management systems T Ma, A Zhang IEEE/ACM Transactions on Computational Biology and Bioinformatics 14 (4 …, 2016 | 15 | 2016 |
Incorporating biological knowledge with factor graph neural network for interpretable deep learning T Ma, A Zhang arXiv preprint arXiv:1906.00537, 2019 | 13 | 2019 |
Recommending people to follow using asymmetric factor models with social graphs T Ma, Y Yang, L Wang, B Yuan Soft Computing in Industrial Applications: Proceedings of the 17th Online …, 2014 | 12 | 2014 |
Enhanced self-renewal of human pluripotent stem cells by simulated microgravity S Timilsina, T Kirsch-Mangu, S Werth, B Shepard, T Ma, LG Villa-Diaz npj Microgravity 8 (1), 22, 2022 | 7 | 2022 |
A framework for robust differential network modular structure discovery from RNA-seq data T Ma, A Zhang 2016 IEEE International Conference on Bioinformatics and Biomedicine (BIBM …, 2016 | 5 | 2016 |
Reconstructing context-specific gene regulatory network and identifying modules and network rewiring through data integration T Ma, A Zhang Methods 124, 36-45, 2017 | 1 | 2017 |
Integrative and interdisciplinary challenges in translational bioinformatics T Ma ACM SIGBioinformatics Record 4 (2), 1-6, 2014 | 1 | 2014 |
β-Catenin in Dendritic Cells Negatively Regulates CD8 T Cell Immune Responses through the Immune Checkpoint Molecule Tim-3 C Fu, J Wang, T Ma, C Yin, L Zhou, BE Clausen, QS Mi, A Jiang Vaccines 12 (5), 460, 2024 | | 2024 |
Multi-omic integrative network analysis T Ma State University of New York at Buffalo, 2019 | | 2019 |