Edans Sandes
Edans Sandes
Verified email at unb.br
TitleCited byYear
Retrieving smith-waterman alignments with optimizations for megabase biological sequences using GPU
EFO Sandes, ACMA de Melo
IEEE Transactions on Parallel and Distributed Systems 24 (5), 1009-1021, 2012
682012
CUDAlign: using GPU to accelerate the comparison of megabase genomic sequences
EFO Sandes, ACMA de Melo
Proceedings of the 15th ACM SIGPLAN symposium on Principles and practice of …, 2010
682010
Smith-waterman alignment of huge sequences with gpu in linear space
EFO Sandes, ACMA de Melo
2011 IEEE International Parallel & Distributed Processing Symposium, 1199-1211, 2011
572011
Cudalign 4.0: Incremental speculative traceback for exact chromosome-wide alignment in gpu clusters
EF de Oliveira Sandes, G Miranda, X Martorell, E Ayguade, G Teodoro, ...
IEEE Transactions on Parallel and Distributed Systems 27 (10), 2838-2850, 2016
332016
CUDAlign 3.0: Parallel biological sequence comparison in large GPU clusters
FO Edans, G Miranda, ACMA de Melo, X Martorell, E Ayguadé
2014 14th IEEE/ACM International Symposium on Cluster, Cloud and Grid …, 2014
252014
An exact parallel algorithm to compare very long biological sequences in clusters of workstations
A Boukerche, ACMA de Melo, EF de Oliveira Sandes, M Ayala-Rincon
Cluster Computing 10 (2), 187-202, 2007
212007
Parallel optimal pairwise biological sequence comparison: Algorithms, platforms, and classification
EFDO Sandes, A Boukerche, ACMAD Melo
ACM Computing Surveys (CSUR) 48 (4), 1-36, 2016
202016
Logical model of relationship for online social networks and performance optimizing of queries
EFO De Sandes, L Weigang, ACMA de Melo
International Conference on Web Information Systems Engineering, 726-736, 2012
172012
Masa: A multiplatform architecture for sequence aligners with block pruning
EF De O. Sandes, G Miranda, X Martorell, E Ayguade, G Teodoro, ...
ACM Transactions on Parallel Computing (TOPC) 2 (4), 1-31, 2016
162016
Querying dynamic communities in online social networks
L Weigang, EFO Sandes, J Zheng, ACMA de MELO, L Uden
Journal of Zhejiang University Science C 15 (2), 81-90, 2014
112014
Bioinformatics of the Paracoccidioides brasiliensis EST Project
MM Brígido, MEMT Walter, AG Oliveira, MK Inoue, DS Anjos, EFO Sandes, ...
FUNPEC-RP, 2005
102005
An agent-based solution for dynamic multi-node wavefront balancing in biological sequence comparison
EFO Sandes, CG Ralha, ACMA de Melo
Expert Systems with Applications 41 (10), 4929-4938, 2014
72014
Fine-grain parallel megabase sequence comparison with multiple heterogeneous GPUs
EF de O. Sandes, G Miranda, ACMA Melo, X Martorell, E Ayguade
Proceedings of the 19th ACM SIGPLAN symposium on Principles and practice of …, 2014
62014
de Melo. CUD-Align: using GPU to accelerate the comparison of megabase genomic sequences
EFO Sandes, MA Alba Cristina
Proceedings of the 15th ACM SIGPLAN Symposium on Principles and Practice of …, 0
6
Algoritmos paralelos exatos e otimizações para alinhamento de sequências biológicas longas em plataformas de alto desempenho
EFO Sandes
42015
Parallel megabase dna sequence comparison with opencl
MAC de Figueiredo, FO Edans, ACMA de Melo
2015 IEEE 22nd International Conference on High Performance Computing (HiPC …, 2015
32015
Comparação paralela de sequências biológicas longas utilizando Unidades de Processamento Gráfico (GPUs)
EFO Sandes
32011
Smith-waterman acceleration in multi-gpus: a performance per watt analysis
JP Serrano, EFDO Sandes, ACMA de Melo, M Ujaldón
International Conference on Bioinformatics and Biomedical Engineering, 512-523, 2017
22017
Bitmap filter: Speeding up exact set similarity joins with bitwise operations
EFO Sandes, GLM Teodoro, ACMA Melo
Information Systems 88, 101449, 2020
12020
Algoritmos paralelos exatos e otimizações para alinhamento de sequências biológicas longas em plataformas de alto desempenho
EF de Oliveira Sandes, ACMA de Melo
Anais do XXIX Concurso de Teses e Dissertações, 67-72, 2020
12020
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Articles 1–20