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David Ascher
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pkCSM: predicting small-molecule pharmacokinetic and toxicity properties using graph-based signatures
DEV Pires, TL Blundell, DB Ascher
Journal of medicinal chemistry 58 (9), 4066-4072, 2015
29942015
mCSM: predicting the effects of mutations in proteins using graph-based signatures
DEV Pires, DB Ascher, TL Blundell
Bioinformatics 30 (3), 335-342, 2014
8792014
DynaMut: predicting the impact of mutations on protein conformation, flexibility and stability
CHM Rodrigues, DEV Pires, DB Ascher
Nucleic acids research 46 (W1), W350-W355, 2018
7952018
DUET: a server for predicting effects of mutations on protein stability using an integrated computational approach
DEV Pires, DB Ascher, TL Blundell
Nucleic acids research 42 (W1), W314-W319, 2014
7642014
SDM: a server for predicting effects of mutations on protein stability
AP Pandurangan, B Ochoa-Montano, DB Ascher, TL Blundell
Nucleic acids research 45 (W1), W229-W235, 2017
4392017
Arpeggio: a web server for calculating and visualising interatomic interactions in protein structures
HC Jubb, AP Higueruelo, B Ochoa-Montaño, WR Pitt, DB Ascher, ...
Journal of molecular biology 429 (3), 365-371, 2017
3782017
A structural biology community assessment of AlphaFold2 applications
M Akdel, DEV Pires, EP Pardo, J Jänes, AO Zalevsky, B Mészáros, ...
Nature Structural & Molecular Biology 29 (11), 1056-1067, 2022
3232022
mCSM-PPI2: predicting the effects of mutations on protein–protein interactions
CHM Rodrigues, Y Myung, DEV Pires, DB Ascher
Nucleic acids research 47 (W1), W338-W344, 2019
2652019
DynaMut2: Assessing changes in stability and flexibility upon single and multiple point missense mutations
CHM Rodrigues, DEV Pires, DB Ascher
Protein Science 30 (1), 60-69, 2021
2532021
Tumour risks and genotype–phenotype correlations associated with germline variants in succinate dehydrogenase subunit genes SDHB, SDHC and SDHD
KA Andrews, DB Ascher, DEV Pires, DR Barnes, L Vialard, RT Casey, ...
Journal of medical genetics 55 (6), 384-394, 2018
2092018
DNA-PKcs structure suggests an allosteric mechanism modulating DNA double-strand break repair
BL Sibanda, DY Chirgadze, DB Ascher, TL Blundell
Science 355 (6324), 520-524, 2017
1742017
Frequent transmission of the Mycobacterium tuberculosis Beijing lineage and positive selection for the EsxW Beijing variant in Vietnam
KE Holt, P McAdam, PVK Thai, NTT Thuong, DTM Ha, NN Lan, NH Lan, ...
Nature genetics 50 (6), 849-856, 2018
1712018
Optimizing genomic medicine in epilepsy through a gene-customized approach to missense variant interpretation
J Traynelis, M Silk, Q Wang, SF Berkovic, L Liu, DB Ascher, DJ Balding, ...
Genome research 27 (10), 1715-1729, 2017
1692017
Mutations at protein-protein interfaces: Small changes over big surfaces have large impacts on human health
HC Jubb, AP Pandurangan, MA Turner, B Ochoa-Montano, TL Blundell, ...
Progress in biophysics and molecular biology 128, 3-13, 2017
1582017
Flexibility and small pockets at protein–protein interfaces: new insights into druggability
H Jubb, TL Blundell, DB Ascher
Progress in biophysics and molecular biology 119 (1), 2-9, 2015
1322015
Potent hepatitis C inhibitors bind directly to NS5A and reduce its affinity for RNA
DB Ascher, J Wielens, TL Nero, L Doughty, CJ Morton, MW Parker
Scientific reports 4 (1), 4765, 2014
1312014
mCSM-lig: quantifying the effects of mutations on protein-small molecule affinity in genetic disease and emergence of drug resistance
DEV Pires, TL Blundell, DB Ascher
Scientific reports 6 (1), 29575, 2016
1302016
Identification and characterization of a new cognitive enhancer based on inhibition of insulin‐regulated aminopeptidase
AL Albiston, CJ Morton, HL Ng, V Pham, HR Yeatman, S Ye, ...
The FASEB Journal 22 (12), 4209-4217, 2008
1192008
Mycobacterium tuberculosis whole genome sequencing and protein structure modelling provides insights into anti-tuberculosis drug resistance
J Phelan, F Coll, R McNerney, DB Ascher, DEV Pires, N Furnham, ...
BMC medicine 14 (1), 1-13, 2016
1162016
mCSM-AB: a web server for predicting antibody–antigen affinity changes upon mutation with graph-based signatures
DEV Pires, DB Ascher
Nucleic acids research 44 (W1), W469-W473, 2016
1142016
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