| Intracellular spatial transcriptomic analysis toolkit (InSTAnT) A Kumar, AW Schrader, B Aggarwal, AE Boroojeny, M Asadian, JY Lee, ... Nature Communications 15 (1), 1-19, 2024 | 7 | 2024 |
| GTED: Graph traversal edit distance AE Boroojeny, A Shrestha, A Sharifi-Zarchi, SR Gallagher, SC Sahinalp, ... Research in Computational Molecular Biology: 22nd Annual International …, 2018 | 4 | 2018 |
| Spectrum Extraction and Clipping for Implicitly Linear Layers AE Boroojeny, M Telgarsky, H Sundaram International Conference on Artificial Intelligence and Statistics, 2971-2979, 2024 | 3* | 2024 |
| BPPart: RNA-RNA interaction partition function in the absence of entropy A Ebrahimpour-Boroojeny, S Rajopadhye, H Chitsaz 21st International Workshop on Algorithms in Bioinformatics (WABI 2021), 2021 | 3 | 2021 |
| Graph traversal edit distance and extensions A Ebrahimpour Boroojeny, A Shrestha, A Sharifi-Zarchi, SR Gallagher, ... Journal of Computational Biology 27 (3), 317-329, 2020 | 3 | 2020 |
| Enrichment of ovine gonadotropes via adenovirus gene targeting enhances assessment of transcriptional changes in response to estradiol-17 beta DA Murtazina, JA Arreguin-Arevalo, JD Cantlon, ... Biology of Reproduction 102 (1), 156-169, 2020 | 3 | 2020 |
| Bppart and bpmax: Rna-rna interaction partition function and structure prediction for the base pair counting model A Ebrahimpour-Boroojeny, S Rajopadhye, H Chitsaz arXiv preprint arXiv:1904.01235, 2019 | 3 | 2019 |
| Time-delay estimation in state and output equations of nonlinear systems using optimal computational approach MA Abooshahab, M Ekramian, M Ataei, A Ebrahimpour-Boroojeny Journal of Optimization Theory and Applications 180, 1036-1064, 2019 | 3 | 2019 |
| PyGTED: Python application for computing graph traversal edit distance A Ebrahimpour Boroojeny, A Shrestha, A Sharifi-Zarchi, SR Gallagher, ... Journal of Computational Biology 27 (3), 436-439, 2020 | 2 | 2020 |
| Theory of graph traversal edit distance, extensions, and applications A Ebrahimpour Boroojeny, H Chitsaz, A Ben-Hur, Z Abdo Colorado State University. Libraries, 2019 | 2 | 2019 |
| SARS-CoV-2 orthologs of pathogenesis-involved small viral RNAs of SARS-CoV AE Boroojeny, H Chitsaz arXiv preprint arXiv:2007.05859, 2020 | 1 | 2020 |
| LOTOS: Layer-wise Orthogonalization for Training Robust Ensembles A Ebrahimpour-Boroojeny, H Sundaram, V Chandrasekaran arXiv preprint arXiv:2410.05136, 2024 | | 2024 |
Hamidreza ChitsazLenzoomerVerified email at algorithmicslab.org
