Fan Shi
Fan Shi
DEDJTR Victorian Government
Verified email at ecodev.vic.gov.au
TitleCited byYear
GWIS-model-free, fast and exhaustive search for epistatic interactions in case-control GWAS
B Goudey, D Rawlinson, Q Wang, F Shi, H Ferra, RM Campbell, L Stern, ...
BMC genomics 14 (3), S10, 2013
622013
Mitigation of inbreeding while preserving genetic gain in genomic breeding programs for outbred plants
Z Lin, F Shi, BJ Hayes, HD Daetwyler
Theoretical and applied genetics 130 (5), 969-980, 2017
122017
Exome sequencing highlights the role of wild-relative introgression in shaping the adaptive landscape of the wheat genome
F He, R Pasam, F Shi, S Kant, G Keeble-Gagnere, P Kay, K Forrest, A Fritz, ...
Nature genetics 51 (5), 896, 2019
102019
Development and validation of a gene expression tumour classifier for cancer of unknown primary
RW Tothill, F Shi, L Paiman, J Bedo, A Kowalczyk, L Mileshkin, E Buela, ...
Pathology 47 (1), 7-12, 2015
102015
GWISFI: A universal GPU interface for exhaustive search of pairwise interactions in case-control GWAS in minutes
Q Wang, F Shi, A Kowalczyk, RM Campbell, B Goudey, D Rawlinson, ...
2014 IEEE International Conference on Bioinformatics and Biomedicine (BIBM …, 2014
102014
Exome sequence genotype imputation in globally diverse hexaploid wheat accessions
F Shi, J Tibbits, RK Pasam, P Kay, D Wong, J Petkowski, KL Forrest, ...
Theoretical and applied genetics 130 (7), 1393-1404, 2017
62017
A bi-ordering approach to linking gene expression with clinical annotations in gastric cancer
F Shi, C Leckie, G MacIntyre, I Haviv, A Boussioutas, A Kowalczyk
BMC bioinformatics 11 (1), 477, 2010
62010
Genomic prediction using prior quantitative trait loci information reveals a large reservoir of underutilised blackleg resistance in diverse canola (Brassica napus L.) lines
M Fikere, DM Barbulescu, MM Malmberg, F Shi, JCO Koh, AT Slater, ...
The plant genome 11 (2), 2018
52018
Interactions within the MHC contribute to the genetic architecture of celiac disease
B Goudey, G Abraham, E Kikianty, Q Wang, D Rawlinson, F Shi, I Haviv, ...
PloS one 12 (3), e0172826, 2017
52017
Meta-analysis of gene expression microarrays with missing replicates
F Shi, G Abraham, C Leckie, I Haviv, A Kowalczyk
BMC bioinformatics 12 (1), 84, 2011
52011
Diversity and genome analysis of Australian and global oilseed Brassica napus L. germplasm using transcriptomics and whole genome re-sequencing
MM Malmberg, F Shi, GC Spangenberg, HD Daetwyler, NOI Cogan
Frontiers in plant science 9, 508, 2018
32018
Precision Medicine: Dawn of Supercomputing in ‘omics Research
M Reumann, KE Holt, M Inouye, T Stinear, B Goudey, G Abraham, ...
eResearch Australasia, 2011
22011
Epistasis within the MHC contributes to the genetic architecture of celiac disease
B Goudey, G Abraham, E Kikianty, Q Wang, D Rawlinson, F Shi, I Haviv, ...
BioRxiv, 002485, 2015
12015
Applications of Class-Conditional Conformal Predictor in Multi-Class Classification
F Shi, CS Ong, C Leckie
2013 12th International Conference on Machine Learning and Applications 1 …, 2013
12013
Extension of a haplotype-based genomic prediction model to manage multi-environment wheat data using environmental covariates
S He, R Thistlethwaite, K Forrest, F Shi, MJ Hayden, R Trethowan, ...
Theoretical and Applied Genetics 132 (11), 3143-3154, 2019
2019
Exome sequencing highlights the role of wild-relative introgression in shaping the adaptive landscape of the wheat genome (vol 50, pg 896, 2019)
F He, R Pasam, F Shi, S Kant, G Keeble-Gagnere, P Kay, K Forrest, A Fritz, ...
NATURE GENETICS 51 (7), 1194-1194, 2019
2019
Publisher Correction: Exome sequencing highlights the role of wild-relative introgression in shaping the adaptive landscape of the wheat genome.
F He, R Pasam, F Shi, S Kant, G Keeble-Gagnere, P Kay, K Forrest, A Fritz, ...
Nature genetics, 2019
2019
Using Sensors and Unmanned Aircraft Systems for High-Throughput Phenotyping of Biomass in Perennial Ryegrass Breeding Trials.
J Wang, P Badenhorst, A Phelan, L Pembleton, F Shi, N Cogan, ...
Frontiers in plant science 10, 2019
2019
Development and in-field validation of genomic and optimal haploid value selection for disease resistance, agronomic, and seed quality traits in canola
HD Daetwyler, M Fikere, DM Barbulescu, MM Malmberg, F Shi, JCO Koh, ...
2019
Establishing a Diverse Multi-Year Genomic Selection Reference Population for Key Traits to Underpin Canola Pre-Breeding
HD Daetwyler, M Fikere, DM Barbulescu, MM Malmberg, F Shi, JCO Koh, ...
AusCanola 2018 Co-hosts, 54, 2018
2018
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