| DNA-binding factors shape the mouse methylome at distal regulatory regions MB Stadler, R Murr, L Burger, R Ivanek, F Lienert, A Schöler, ... Nature 480 (7378), 490-495, 2011 | 1137 | 2011 |
| Deja vu in proteomics. A hit parade of repeatedly identified differentially expressed proteins J Petrak, R Ivanek, O Toman, R Cmejla, J Cmejlova, D Vyoral, J Zivny, ... Proteomics 8 (9), 1744-1749, 2008 | 401 | 2008 |
| Visualizing genomic data using Gviz and bioconductor F Hahne, R Ivanek Statistical genomics, 335-351, 2016 | 312 | 2016 |
| Methylation-dependent and-independent genomic targeting principles of the MBD protein family T Baubec, R Ivánek, F Lienert, D Schübeler Cell 153 (2), 480-492, 2013 | 291 | 2013 |
| Mutations in DNAJC5, encoding cysteine-string protein alpha, cause autosomal-dominant adult-onset neuronal ceroid lipofuscinosis L Nosková, V Stránecký, H Hartmannová, A Přistoupilová, V Barešová, ... The American Journal of Human Genetics 89 (2), 241-252, 2011 | 238 | 2011 |
| TMEM70 mutations cause isolated ATP synthase deficiency and neonatal mitochondrial encephalocardiomyopathy A Čížková, V Stránecký, JA Mayr, M Tesařová, V Havlíčková, J Paul, ... Nature genetics 40 (11), 1288-1290, 2008 | 210 | 2008 |
| Transcription factor occupancy can mediate active turnover of DNA methylation at regulatory regions A Feldmann, R Ivanek, R Murr, D Gaidatzis, L Burger, D Schübeler PLoS Genet 9 (12), e1003994, 2013 | 180 | 2013 |
| Dominant renin gene mutations associated with early-onset hyperuricemia, anemia, and chronic kidney failure M Živná, H Hůlková, M Matignon, K Hodaňová, P Vylet'al, M Kalbáčová, ... The American Journal of Human Genetics 85 (2), 204-213, 2009 | 137 | 2009 |
| Chromosomal rearrangement interferes with meiotic X chromosome inactivation D Homolka, R Ivanek, J Capkova, P Jansa, J Forejt Genome Research 17 (10), 1431-1437, 2007 | 107 | 2007 |
| Tead2 expression levels control the subcellular distribution of Yap and Taz, zyxin expression and epithelial–mesenchymal transition M Diepenbruck, L Waldmeier, R Ivanek, P Berninger, P Arnold, ... Journal of cell science 127 (7), 1523-1536, 2014 | 105 | 2014 |
| Mutations in TMEM76 cause mucopolysaccharidosis IIIC (Sanfilippo C syndrome) M Hřebíček, L Mrázová, V Seyrantepe, S Durand, NM Roslin, L Nosková, ... The American Journal of Human Genetics 79 (5), 807-819, 2006 | 102 | 2006 |
| Distinct progenitor lineages contribute to the heterogeneity of plasmacytoid dendritic cells PF Rodrigues, L Alberti-Servera, A Eremin, GE Grajales-Reyes, R Ivanek, ... Nature immunology 19 (7), 711-722, 2018 | 99 | 2018 |
| HIF and reactive oxygen species regulate oxidative phosphorylation in cancer E Hervouet, A Cízková, J Demont, A Vojtísková, P Pecina, ... Carcinogenesis 29 (8), 1528-1537, 2008 | 96 | 2008 |
| Attenuated sensing of SHH by Ptch1 underlies evolution of bovine limbs J Lopez-Rios, A Duchesne, D Speziale, G Andrey, KA Peterson, ... Nature 511 (7507), 46-51, 2014 | 91 | 2014 |
| Gain fat—lose metastasis: converting invasive breast cancer cells into adipocytes inhibits cancer metastasis D Ishay-Ronen, M Diepenbruck, RKR Kalathur, N Sugiyama, S Tiede, ... Cancer Cell 35 (1), 17-32. e6, 2019 | 80 | 2019 |
| Induction of hypoxia and necrosis in multicellular tumor spheroids is associated with resistance to chemotherapy treatment S Däster, N Amatruda, D Calabrese, R Ivanek, E Turrini, RA Droeser, ... Oncotarget 8 (1), 1725, 2017 | 74 | 2017 |
| A tumor suppressor function for notch signaling in forebrain tumor subtypes C Giachino, JL Boulay, R Ivanek, A Alvarado, C Tostado, S Lugert, ... Cancer cell 28 (6), 730-742, 2015 | 74 | 2015 |
| HAND2 targets define a network of transcriptional regulators that compartmentalize the early limb bud mesenchyme M Osterwalder, D Speziale, M Shoukry, R Mohan, R Ivanek, M Kohler, ... Developmental cell 31 (3), 345-357, 2014 | 66 | 2014 |
| Chromatin measurements reveal contributions of synthesis and decay to steady‐state mRNA levels SC Tippmann, R Ivanek, D Gaidatzis, A Schöler, L Hoerner, ... Molecular systems biology 8 (1), 593, 2012 | 49 | 2012 |
| Bioreactor-engineered cancer tissue-like structures mimic phenotypes, gene expression profiles and drug resistance patterns observed “in vivo” C Hirt, A Papadimitropoulos, MG Muraro, V Mele, E Panopoulos, ... Biomaterials 62, 138-146, 2015 | 46 | 2015 |
Erik van NimwegenProfessor of computational systems biology, Biozentrum, University of BaselVerified email at unibas.ch
