The SILVA ribosomal RNA gene database project: improved data processing and web-based tools C Quast, E Pruesse, P Yilmaz, J Gerken, T Schweer, P Yarza, J Peplies, ... Nucleic acids research 41 (D1), D590-D596, 2012 | 26940 | 2012 |
The SILVA and “all-species living tree project (LTP)” taxonomic frameworks P Yilmaz, LW Parfrey, P Yarza, J Gerken, E Pruesse, C Quast, T Schweer, ... Nucleic acids research 42 (D1), D643-D648, 2014 | 3298 | 2014 |
Uniting the classification of cultured and uncultured bacteria and archaea using 16S rRNA gene sequences P Yarza, P Yilmaz, E Pruesse, FO Glöckner, W Ludwig, KH Schleifer, ... Nature Reviews Microbiology 12 (9), 635-645, 2014 | 2488 | 2014 |
Minimum information about a single amplified genome (MISAG) and a metagenome-assembled genome (MIMAG) of bacteria and archaea RM Bowers, NC Kyrpides, R Stepanauskas, M Harmon-Smith, D Doud, ... Nature biotechnology 35 (8), 725-731, 2017 | 1750 | 2017 |
Minimum information about a biosynthetic gene cluster MH Medema, R Kottmann, P Yilmaz, M Cummings, JB Biggins, K Blin, ... Nature chemical biology 11 (9), 625-631, 2015 | 915 | 2015 |
25 years of serving the community with ribosomal RNA gene reference databases and tools FO Glöckner, P Yilmaz, C Quast, J Gerken, A Beccati, A Ciuprina, G Bruns, ... Journal of biotechnology 261, 169-176, 2017 | 812 | 2017 |
Minimum information about a marker gene sequence (MIMARKS) and minimum information about any (x) sequence (MIxS) specifications P Yilmaz, R Kottmann, D Field, R Knight, JR Cole, L Amaral-Zettler, ... Nature biotechnology 29 (5), 415-420, 2011 | 767 | 2011 |
Minimum information about an uncultivated virus genome (MIUViG) S Roux, EM Adriaenssens, BE Dutilh, EV Koonin, AM Kropinski, ... Nature biotechnology 37 (1), 29-37, 2019 | 533 | 2019 |
Proposal to reclassify the proteobacterial classes Deltaproteobacteria and Oligoflexia, and the phylum Thermodesulfobacteria into four phyla reflecting major … DW Waite, M Chuvochina, C Pelikan, DH Parks, P Yilmaz, M Wagner, ... International Journal of Systematic and Evolutionary Microbiology 70 (11 …, 2020 | 474 | 2020 |
The small unicellular diazotrophic symbiont, UCYN-A, is a key player in the marine nitrogen cycle C Martínez-Pérez, W Mohr, CR Löscher, J Dekaezemacker, S Littmann, ... Nature Microbiology 1 (11), 1-7, 2016 | 217 | 2016 |
Expanding the world of marine bacterial and archaeal clades P Yilmaz, P Yarza, JZ Rapp, FO Glöckner Frontiers in microbiology 6, 2016 | 153 | 2016 |
Phylogeny-aware identification and correction of taxonomically mislabeled sequences AM Kozlov, J Zhang, P Yilmaz, FO Glöckner, A Stamatakis Nucleic acids research 44 (11), 5022-5033, 2016 | 113 | 2016 |
The importance of designating type material for uncultured taxa M Chuvochina, C Rinke, DH Parks, MS Rappé, GW Tyson, P Yilmaz, ... Systematic and applied microbiology 42 (1), 15-21, 2019 | 105 | 2019 |
Improved taxonomic assignment of rumen bacterial 16S rRNA sequences using a revised SILVA taxonomic framework G Henderson, P Yilmaz, S Kumar, RJ Forster, WJ Kelly, SC Leahy, ... PeerJ 7, e6496, 2019 | 99 | 2019 |
Adaptability as the key to success for the ubiquitous marine nitrite oxidizer Nitrococcus J Füssel, S Lücker, P Yilmaz, B Nowka, MAHJ van Kessel, P Bourceau, ... Science Advances 3 (11), e1700807, 2017 | 98 | 2017 |
Refining the taxonomic structure of the phylum Acidobacteria SN Dedysh, P Yilmaz International journal of systematic and evolutionary microbiology 68 (12 …, 2018 | 96 | 2018 |
UniEuk: Time to Speak a Common Language in Protistology! C Berney, A Ciuprina, S Bender, J Brodie, V Edgcomb, E Kim, J Rajan, ... Journal of Eukaryotic Microbiology 64 (3), 407-411, 2017 | 81 | 2017 |
Terrestrial-type nitrogen-fixing symbiosis between seagrass and a marine bacterium W Mohr, N Lehnen, S Ahmerkamp, HK Marchant, JS Graf, B Tschitschko, ... Nature 600 (7887), 105-109, 2021 | 80 | 2021 |
A phylogenetic framework for the kingdom Fungi based on 18S rRNA gene sequences P Yarza, P Yilmaz, K Panzer, FO Glöckner, M Reich Marine genomics 36, 33-39, 2017 | 80* | 2017 |
FO Glöckner The SILVA ribosomal RNA gene database project: Improved data processing and web-based tools., 2013, 41, pp C Quast, E Pruesse, P Yilmaz, J Gerken, T Schweer, P Yarza, J Peplies D590-D596. DOI: https://doi. org/10.1093/nar/gks1219, 0 | 79 | |