| Assemblathon 2: evaluating de novo methods of genome assembly in three vertebrate species KR Bradnam, JN Fass, A Alexandrov, P Baranay, M Bechner, I Birol, ... Gigascience 2 (1), 2047-217X-2-10, 2013 | 792 | 2013 |
| Sickle: A sliding-window, adaptive, quality-based trimming tool for FastQ files (Version 1.33)[Software] NA Joshi, JN Fass | 705 | 2011 |
| Assemblathon 1: a competitive assessment of de novo short read assembly methods D Earl, K Bradnam, JS John, A Darling, D Lin, J Fass, HOK Yu, V Buffalo, ... Genome research 21 (12), 2224-2241, 2011 | 631 | 2011 |
| Sickle: a sliding-window, adaptive, quality-based trimming tool for FastQ files NA Joshi, JN Fass | 540 | 2011 |
| Sickle: a sliding-window, adaptive, quality-based trimming tool for FastQ files (version 1.33) NA Joshi, JN Fass | 493 | 2011 |
| Discovery of rare mutations in populations: TILLING by sequencing H Tsai, T Howell, R Nitcher, V Missirian, B Watson, KJ Ngo, M Lieberman, ... Plant physiology 156 (3), 1257-1268, 2011 | 324 | 2011 |
| Transcriptome profiling of citrus fruit response to huanglongbing disease F Martinelli, SL Uratsu, U Albrecht, RL Reagan, ML Phu, M Britton, ... PloS one 7 (5), e38039, 2012 | 204 | 2012 |
| Tensile force-dependent neurite elicitation via anti-β1 integrin antibody-coated magnetic beads JN Fass, DJ Odde Biophysical journal 85 (1), 623-636, 2003 | 136 | 2003 |
| High density SNP mapping and QTL analysis for fruit quality characteristics in peach (Prunus persica L.) PJ Martínez-García, DE Parfitt, EA Ogundiwin, J Fass, HM Chan, ... Tree Genetics & Genomes 9, 19-36, 2013 | 125 | 2013 |
| Mitochondrial DNA variant discovery and evaluation in human Cardiomyopathies through next-generation sequencing MV Zaragoza, J Fass, M Diegoli, D Lin, E Arbustini PloS one 5 (8), e12295, 2010 | 117 | 2010 |
| Sickle: a sliding-window, adaptive, quality-based trimming tool for FastQ files. 2011 NA Joshi, JN Fass URL https://github. com/najoshi/sickle, 2018 | 105 | 2018 |
| Whole genome sequencing of peach (Prunus persica L.) for SNP identification and selection R Ahmad, DE Parfitt, J Fass, E Ogundiwin, A Dhingra, TM Gradziel, D Lin, ... BMC genomics 12, 1-7, 2011 | 104 | 2011 |
| Sickle: a sliding-window, adaptive, quality-based trimming tool for FastQ files (version 1.33). 2011 NA Joshi, JN Fass URL https://githubcom/najoshi/sickle, 2016 | 85 | 2016 |
| Genome-Scale Analysis of Programmed DNA Elimination Sites in Tetrahymena thermophila JN Fass, NA Joshi, MT Couvillion, J Bowen, MA Gorovsky, EP Hamilton, ... G3: Genes| Genomes| Genetics 1 (6), 515-522, 2011 | 81 | 2011 |
| Sickle-A windowed adaptive trimming tool for FASTQ files using quality N Joshi, J Fass Version 1.33, 2011 | 72 | 2011 |
| Exploring the Transcriptome Landscape of Pomegranate Fruit Peel for Natural Product Biosynthetic Gene and SSR Marker DiscoveryF NN Ono, MT Britton, JN Fass, CM Nicolet, D Lin, L Tian Journal of integrative plant biology 53 (10), 800-813, 2011 | 69 | 2011 |
| Reference genome-independent assessment of mutation density using restriction enzyme-phased sequencing J Monson-Miller, DC Sanchez-Mendez, J Fass, IM Henry, TH Tai, L Comai BMC genomics 13, 1-15, 2012 | 65 | 2012 |
| Genome-wide SNP discovery in walnut with an AGSNP pipeline updated for SNP discovery in allogamous organisms FM You, KR Deal, J Wang, MT Britton, JN Fass, D Lin, AM Dandekar, ... BMC genomics 13, 1-16, 2012 | 56 | 2012 |
| RNA-seq analyses of changes in the Anopheles gambiae transcriptome associated with resistance to pyrethroids in Kenya: identification of candidate-resistance … M Bonizzoni, E Ochomo, WA Dunn, M Britton, Y Afrane, G Zhou, J Hartsel, ... Parasites & vectors 8, 1-13, 2015 | 54 | 2015 |
| A label-free differential quantitative mass spectrometry method for the characterization and identification of protein changes during citrus fruit development E Katz, M Fon, RA Eigenheer, BS Phinney, JN Fass, D Lin, A Sadka, ... Proteome Science 8, 1-19, 2010 | 54 | 2010 |
