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Ruidong Xiang
Ruidong Xiang
AgriBio Centre for AgriBioscience | Cambridge-Baker Systems Genomics Initiative | UniMelb
Verified email at agriculture.vic.gov.au
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Year
Functional annotations of three domestic animal genomes provide vital resources for comparative and agricultural research
C Kern, Y Wang, X Xu, Z Pan, M Halstead, G Chanthavixay, P Saelao, ...
Nature communications 12 (1), 1821, 2021
1192021
Quantifying the contribution of sequence variants with regulatory and evolutionary significance to 34 bovine complex traits
R Xiang, I van den Berg, IM MacLeod, BJ Hayes, CP Prowse-Wilkins, ...
Proceedings of the National Academy of Sciences 116 (39), 19398-19408, 2019
1192019
Genome-wide fine-mapping identifies pleiotropic and functional variants that predict many traits across global cattle populations
R Xiang, IM MacLeod, HD Daetwyler, G de Jong, E O’Connor, ...
Nature communications 12 (1), 860, 2021
822021
A multi-tissue atlas of regulatory variants in cattle
S Liu, Y Gao, O Canela-Xandri, S Wang, Y Yu, W Cai, B Li, R Xiang, ...
Nature genetics 54 (9), 1438-1447, 2022
772022
Epithelial, metabolic and innate immunity transcriptomic signatures differentiating the rumen from other sheep and mammalian gastrointestinal tract tissues
R Xiang, VH Oddy, AL Archibald, PE Vercoe, BP Dalrymple
PeerJ 4, e1762, 2016
532016
Enhanced autophagy contributes to protective effects of IL-22 against acetaminophen-induced liver injury
R Mo, R Lai, J Lu, Y Zhuang, T Zhou, S Jiang, P Ren, Z Li, Z Cao, Y Liu, ...
Theranostics 8 (15), 4170, 2018
512018
Genome-wide comparative analyses of correlated and uncorrelated phenotypes identify major pleiotropic variants in dairy cattle
R Xiang, IM MacLeod, S Bolormaa, ME Goddard
Scientific reports 7 (1), 9248, 2017
482017
New loci and neuronal pathways for resilience to heat stress in cattle
EK Cheruiyot, M Haile-Mariam, BG Cocks, IM MacLeod, R Xiang, ...
Scientific reports 11 (1), 16619, 2021
472021
Meta-analysis for milk fat and protein percentage using imputed sequence variant genotypes in 94,321 cattle from eight cattle breeds
I van den Berg, R Xiang, J Jenko, H Pausch, M Boussaha, C Schrooten, ...
Genetics Selection Evolution 52 (1), 1-16, 2020
462020
Genome variants associated with RNA splicing variations in bovine are extensively shared between tissues
R Xiang, BJ Hayes, CJ Vander Jagt, IM MacLeod, M Khansefid, ...
BMC genomics 19 (1), 521, 2018
422018
A compendium of genetic regulatory effects across pig tissues
J Teng, Y Gao, H Yin, Z Bai, S Liu, H Zeng, PigGTEx Consortium, L Bai, ...
Nature Genetics, 1-12, 2024
372024
A sheep pangenome reveals the spectrum of structural variations and their effects on tail phenotypes
R Li, M Gong, X Zhang, F Wang, Z Liu, L Zhang, Q Yang, Y Xu, M Xu, ...
Genome Research 33 (3), 463-477, 2023
322023
A comprehensive catalogue of regulatory variants in the cattle transcriptome
S Liu, Y Gao, O Canela-Xandri, S Wang, Y Yu, W Cai, B Li, R Xiang, ...
bioRxiv, 2021
282021
Effect direction meta-analysis of GWAS identifies extreme, prevalent and shared pleiotropy in a large mammal
R Xiang, I van den Berg, IM MacLeod, HD Daetwyler, ME Goddard
Communications biology 3 (1), 88, 2020
272020
Gene network analysis identifies rumen epithelial cell proliferation, differentiation and metabolic pathways perturbed by diet and correlated with methane production
R Xiang, J McNally, S Rowe, A Jonker, CS Pinares-Patino, VH Oddy, ...
Scientific reports 6, 2016
272016
Analyses of inter-individual variations of sperm DNA methylation and their potential implications in cattle
S Liu, L Fang, Y Zhou, DJA Santos, R Xiang, HD Daetwyler, ...
BMC genomics 20, 1-14, 2019
252019
Putative causal variants are enriched in annotated functional regions from six bovine tissues
CP Prowse-Wilkins, J Wang, R Xiang, JB Garner, ME Goddard, ...
Frontiers in genetics 12, 664379, 2021
24*2021
Genetic variations of NTCP are associated with susceptibility to HBV infection and related hepatocellular carcinoma
P Wang, R Mo, R Lai, Y Xu, J Lu, G Zhao, Y Liu, Z Cao, X Wang, Z Li, ...
Oncotarget 8 (62), 105407, 2017
232017
Expression of mitochondrial protein genes encoded by nuclear and mitochondrial genomes correlate with energy metabolism in dairy cattle
J Dorji, CJ Vander Jagt, JB Garner, LC Marett, BA Mason, CM Reich, ...
BMC genomics 21, 1-17, 2020
182020
Expression quantitative trait loci in sheep liver and muscle contribute to variations in meat traits
Z Yuan, B Sunduimijid, R Xiang, R Behrendt, MI Knight, BA Mason, ...
Genetics Selection Evolution 53 (1), 1-14, 2021
172021
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