| Musket: a multistage k-mer spectrum-based error corrector for Illumina sequence data Y Liu, J Schröder, B Schmidt Bioinformatics 29 (3), 308-315, 2013 | 316 | 2013 |
| UV-associated mutations underlie the etiology of MCV-negative Merkel cell carcinomas SQ Wong, K Waldeck, IA Vergara, J Schröder, J Madore, JS Wilmott, ... Cancer research 75 (24), 5228-5234, 2015 | 313 | 2015 |
| GRIDSS: sensitive and specific genomic rearrangement detection using positional de Bruijn graph assembly D Cameron, J Schröder, J Penington, H Do, R Molania, A Dobrovic, ... Genome Research, 2050-2060, 2017 | 276 | 2017 |
| Modelling human blastocysts by reprogramming fibroblasts into iBlastoids X Liu, JP Tan, J Schröder, A Aberkane, JF Ouyang, M Mohenska, SM Lim, ... Nature 591 (7851), 627-632, 2021 | 225 | 2021 |
| SHREC: a short-read error correction method J Schröder, H Schröder, SJ Puglisi, R Sinha, B Schmidt Bioinformatics 25 (17), 2157-2163, 2009 | 212 | 2009 |
| Correcting errors in short reads by multiple alignments L Salmela, J Schröder Bioinformatics 27 (11), 1455-1461, 2011 | 211 | 2011 |
| The architecture and evolution of cancer neochromosomes DW Garsed, OJ Marshall, VDA Corbin, A Hsu, L Di Stefano, J Schröder, ... Cancer cell 26 (5), 653-667, 2014 | 180 | 2014 |
| Reprogramming roadmap reveals route to human induced trophoblast stem cells X Liu, JF Ouyang, FJ Rossello, JP Tan, KC Davidson, DS Valdes, ... Nature 586 (7827), 101-107, 2020 | 134 | 2020 |
| Socrates: identification of genomic rearrangements in tumour genomes by re-aligning soft clipped reads J Schröder, A Hsu, SE Boyle, G Macintyre, M Cmero, RW Tothill, ... Bioinformatics 30 (8), 1064-1072, 2014 | 99 | 2014 |
| HECTOR: a parallel multistage homopolymer spectrum based error corrector for 454 sequencing data A Wirawan, RS Harris, Y Liu, B Schmidt, J Schröder BMC bioinformatics 15, 1-13, 2014 | 44 | 2014 |
| Nicotinamide riboside attenuates age-associated metabolic and functional changes in hematopoietic stem cells X Sun, B Cao, M Naval-Sanchez, T Pham, YBY Sun, B Williams, ... Nature communications 12 (1), 2665, 2021 | 42 | 2021 |
| Genomic characterisation of Eμ-Myc mouse lymphomas identifies Bcor as a Myc co-operative tumour-suppressor gene M Lefebure, R Tothill, E Kruse, E Hawkins, J Shortt, G Matthews, ... Nature Communications, 2017 | 42 | 2017 |
| Reference-free validation of short read data J Schröder, J Bailey, T Conway, J Zobel PLoS One 5 (9), e12681, 2010 | 37 | 2010 |
| An orthotopic mouse model of gastric cancer invasion and metastasis R Busuttil, D Liu, N Costanzo, J Schröder, C Mitchell, A Boussioutas Scientific Reports 8 (825), 2018 | 35 | 2018 |
| Inferring structural variant cancer cell fraction M Cmero, K Yuan, CS Ong, J Schröder, NM Corcoran, T Papenfuss, ... Nature communications 11 (1), 730, 2020 | 32 | 2020 |
| Multi-level remodelling of chromatin underlying activation of human T cells NG Bediaga, HD Coughlan, TM Johanson, AL Garnham, G Naselli, ... Scientific reports 11 (1), 528, 2021 | 29 | 2021 |
| The Scalloped and Nerfin-1 transcription factors cooperate to maintain neuronal cell fate JHA Vissers, F Froldi, J Schröder, AT Papenfuss, LY Cheng, KF Harvey Cell reports 25 (6), 1561-1576. e7, 2018 | 28 | 2018 |
| A forward genetic screen identifies a negative regulator of rapid Ca2+-dependent cell egress (MS1) in the intracellular parasite Toxoplasma gondii J McCoy, R Stewart, A Uboldi, D Li, J Schröder, N Scott, A Papenfuss, ... The Journal of Biological Chemistry, 7662-7674, 2017 | 26 | 2017 |
| A massively parallel architecture for bioinformatics G Pfeiffer, S Baumgart, J Schröder, M Schimmler Computational Science–ICCS 2009: 9th International Conference Baton Rouge …, 2009 | 21 | 2009 |
| Type 2 immune polarization is associated with cardiopulmonary disease in preterm infants JC Lao, CB Bui, MA Pang, SX Cho, I Rudloff, K Elgass, J Schröder, ... Science translational medicine 14 (639), eaaz8454, 2022 | 18 | 2022 |
Professor Tony PapenfussTheme Leader, Computational Biology, Walter and Eliza Hall Institute of MedicalVerified email at wehi.edu.au
