PanTools v3: functional annotation, classification and phylogenomics EM Jonkheer, DJM van Workum, S Sheikhizadeh Anari, B Brankovics, ... Bioinformatics 38 (18), 4403-4405, 2022 | 24 | 2022 |
Genetic mechanisms underlying increased microalgal thermotolerance, maximal growth rate, and yield on light following adaptive laboratory evolution R Barten, DJM Van Workum, E de Bakker, J Risse, M Kleisman, ... BMC biology 20 (1), 242, 2022 | 11 | 2022 |
Genome assembly and analysis of Lactuca virosa: implications for lettuce breeding W Xiong, DJM van Workum, L Berke, LV Bakker, E Schijlen, FFM Becker, ... G3: Genes, Genomes, Genetics 13 (11), jkad204, 2023 | 4 | 2023 |
The genome of Lactuca saligna, a wild relative of lettuce, provides insight into non‐host resistance to the downy mildew Bremia lactucae W Xiong, L Berke, R Michelmore, DJM van Workum, FFM Becker, ... The Plant Journal 115 (1), 108-126, 2023 | 4 | 2023 |
Panva: Pangenomic variant analysis A van den Brandt, EM Jonkheer, DJM van Workum, H van de Wetering, ... IEEE Transactions on Visualization and Computer Graphics, 2023 | 3 | 2023 |
Visual Exploration of Genetic Sequence Variants in Pangenomes. A van den Brandt, EM Jonkheer, DJM van Workum, S Smit, A Vilanova EuroVis (Posters), 27-29, 2022 | 2 | 2022 |
The Importance of PAVs and CNVs in the Lactuca Pangenome. DJM van Workum, SL Mehrem, BL Snoek, MC Alderkamp, D Lapin, ... Plant and Animal Genome Conference/PAG 31 (January 12-17, 2024), 2024 | | 2024 |
Pantools: Pangenomics to Utilize the Wealth of High-Quality Genomes DJM van Workum, EM Jonkheer, R van Esch, M Moed, T van Lankveld, ... Plant and Animal Genome Conference/PAG 31 (January 12-17, 2024), 2024 | | 2024 |
Lactuca super-pangenome reduces bias towards reference genes in lettuce research DJM van Workum, SL Mehrem, BL Snoek, MC Alderkamp, D Lapin, ... bioRxiv, 2024.06. 20.599299, 2024 | | 2024 |