Frédéric Choulet
Frédéric Choulet
INRA Clermont-Ferrand
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A chromosome-based draft sequence of the hexaploid bread wheat (Triticum aestivum) genome
International Wheat Genome Sequencing Consortium
Science 345 (6194), 2014
Shifting the limits in wheat research and breeding using a fully annotated reference genome
R Appels, K Eversole, N Stein, C Feuillet, B Keller, J Rogers, CJ Pozniak, ...
Science 361 (6403), 2018
Ancient hybridizations among the ancestral genomes of bread wheat
T Marcussen, SR Sandve, L Heier, M Spannagl, M Pfeifer, KS Jakobsen, ...
science 345 (6194), 2014
A physical map of the 1-gigabase bread wheat chromosome 3B
E Paux, P Sourdille, J Salse, C Saintenac, F Choulet, P Leroy, A Korol, ...
science 322 (5898), 101-104, 2008
Structural and functional partitioning of bread wheat chromosome 3B
F Choulet, A Alberti, S Theil, N Glover, V Barbe, J Daron, L Pingault, ...
Science 345 (6194), 2014
The transcriptional landscape of polyploid wheat
RH Ramírez-González, P Borrill, D Lang, SA Harrington, J Brinton, ...
Science 361 (6403), 2018
Megabase level sequencing reveals contrasted organization and evolution patterns of the wheat gene and transposable element spaces
F Choulet, T Wicker, C Rustenholz, E Paux, J Salse, P Leroy, S Schlub, ...
The Plant Cell 22 (6), 1686-1701, 2010
Frequent gene movement and pseudogene evolution is common to the large and complex genomes of wheat, barley, and their relatives
T Wicker, KFX Mayer, H Gundlach, M Martis, B Steuernagel, U Scholz, ...
The Plant Cell 23 (5), 1706-1718, 2011
Linking the International Wheat Genome Sequencing Consortium bread wheat reference genome sequence to wheat genetic and phenomic data
M Alaux, J Rogers, T Letellier, R Flores, F Alfama, C Pommier, N Mohellibi, ...
Genome biology 19 (1), 1-10, 2018
Insertion site‐based polymorphism markers open new perspectives for genome saturation and marker‐assisted selection in wheat
E Paux, S Faure, F Choulet, D Roger, V Gauthier, JP Martinant, ...
Plant Biotechnology Journal 8 (2), 196-210, 2010
Impact of transposable elements on genome structure and evolution in bread wheat
T Wicker, H Gundlach, M Spannagl, C Uauy, P Borrill, ...
Genome biology 19 (1), 1-18, 2018
Evolution of the Terminal Regions of the Streptomyces Linear Chromosome
F Choulet, B Aigle, A Gallois, S Mangenot, C Gerbaud, C Truong, ...
Molecular biology and evolution 23 (12), 2361-2369, 2006
High throughput SNP discovery and genotyping in hexaploid wheat
H Rimbert, B Darrier, J Navarro, J Kitt, F Choulet, M Leveugle, J Duarte, ...
PloS one 13 (1), e0186329, 2018
Deep transcriptome sequencing provides new insights into the structural and functional organization of the wheat genome
L Pingault, F Choulet, A Alberti, N Glover, P Wincker, C Feuillet, E Paux
Genome biology 16 (1), 1-15, 2015
Organization and evolution of transposable elements along the bread wheat chromosome 3B
J Daron, N Glover, L Pingault, S Theil, V Jamilloux, E Paux, V Barbe, ...
Genome biology 15 (12), 1-15, 2014
Worldwide phylogeography and history of wheat genetic diversity
F Balfourier, S Bouchet, S Robert, R De Oliveira, H Rimbert, J Kitt, ...
Science advances 5 (5), eaav0536, 2019
TriAnnot: a versatile and high performance pipeline for the automated annotation of plant genomes
P Leroy, N Guilhot, H Sakai, A Bernard, F Choulet, S Theil, S Reboux, ...
Frontiers in plant science 3, 5, 2012
Conjugative Transfer of the Integrative Conjugative Elements ICESt1 and ICESt3 from Streptococcus thermophilus
X Bellanger, AP Roberts, C Morel, F Choulet, G Pavlovic, P Mullany, ...
Journal of bacteriology 191 (8), 2764-2775, 2009
Wheat centromeric retrotransposons: the new ones take a major role in centromeric structure
B Li, F Choulet, Y Heng, W Hao, E Paux, Z Liu, W Yue, W Jin, C Feuillet, ...
The Plant Journal 73 (6), 952-965, 2013
A high density physical map of chromosome 1BL supports evolutionary studies, map-based cloning and sequencing in wheat
R Philippe, E Paux, I Bertin, P Sourdille, F Choulet, C Laugier, H Šimková, ...
Genome biology 14 (6), 1-22, 2013
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