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Igor Vorobyov
Igor Vorobyov
University of California Davis, School of Medicine, Departments of Physiology and Membrane Biology
Verified email at ucdavis.edu
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Cited by
Cited by
Year
CHARMM general force field: A force field for drug‐like molecules compatible with the CHARMM all‐atom additive biological force fields
K Vanommeslaeghe, E Hatcher, C Acharya, S Kundu, S Zhong, J Shim, ...
Journal of computational chemistry 31 (4), 671-690, 2010
61582010
Update of the CHARMM all-atom additive force field for lipids: validation on six lipid types
JB Klauda, RM Venable, JA Freites, JW O’Connor, DJ Tobias, ...
The journal of physical chemistry B 114 (23), 7830-7843, 2010
40212010
A polarizable model of water for molecular dynamics simulations of biomolecules
G Lamoureux, E Harder, IV Vorobyov, B Roux, AD MacKerell Jr
Chemical Physics Letters 418 (1-3), 245-249, 2006
6822006
Simulating monovalent and divalent ions in aqueous solution using a Drude polarizable force field
H Yu, TW Whitfield, E Harder, G Lamoureux, I Vorobyov, VM Anisimov, ...
Journal of chemical theory and computation 6 (3), 774-786, 2010
4662010
Determination of electrostatic parameters for a polarizable force field based on the classical Drude oscillator
VM Anisimov, G Lamoureux, IV Vorobyov, N Huang, B Roux, ...
Journal of chemical theory and computation 1 (1), 153-168, 2005
3252005
The different interactions of lysine and arginine side chains with lipid membranes
L Li, I Vorobyov, TW Allen
The journal of physical chemistry B 117 (40), 11906-11920, 2013
3102013
Additive and classical drude polarizable force fields for linear and cyclic ethers
I Vorobyov, VM Anisimov, S Greene, RM Venable, A Moser, RW Pastor, ...
Journal of chemical theory and computation 3 (3), 1120-1133, 2007
2812007
Polarizable empirical force field for alkanes based on the classical drude oscillator model
IV Vorobyov, VM Anisimov, AD MacKerell
The Journal of Physical Chemistry B 109 (40), 18988-18999, 2005
2342005
Polarizable empirical force field for the primary and secondary alcohol series based on the classical Drude model
VM Anisimov, IV Vorobyov, B Roux, AD MacKerell
Journal of chemical theory and computation 3 (6), 1927-1946, 2007
1742007
Atomic level anisotropy in the electrostatic modeling of lone pairs for a polarizable force field based on the classical Drude oscillator
E Harder, VM Anisimov, IV Vorobyov, PEM Lopes, SY Noskov, ...
Journal of chemical theory and computation 2 (6), 1587-1597, 2006
1722006
Hydrogen bonding in monomers and dimers of 2-aminoethanol
I Vorobyov, MC Yappert, DB DuPré
The Journal of Physical Chemistry A 106 (4), 668-679, 2002
1392002
Potential of Mean Force and pKa Profile Calculation for a Lipid Membrane-Exposed Arginine Side Chain
L Li, I Vorobyov, TW Allen
The journal of physical chemistry B 112 (32), 9574-9587, 2008
1222008
Conformational studies of sphingolipids by NMR spectroscopy. II. Sphingomyelin
CM Talbott, I Vorobyov, D Borchman, KG Taylor, DB DuPré, MC Yappert
Biochimica et Biophysica Acta (BBA)-Biomembranes 1467 (2), 326-337, 2000
1142000
Assessing atomistic and coarse-grained force fields for protein− lipid interactions: the formidable challenge of an ionizable side chain in a membrane
I Vorobyov, L Li, TW Allen
The journal of physical chemistry B 112 (32), 9588-9602, 2008
1132008
Ion conduction and conformational flexibility of a bacterial voltage-gated sodium channel
C Boiteux, I Vorobyov, TW Allen
Proceedings of the National Academy of Sciences 111 (9), 3454-3459, 2014
1082014
Ion-induced defect permeation of lipid membranes
I Vorobyov, TE Olson, JH Kim, RE Koeppe, OS Andersen, TW Allen
Biophysical journal 106 (3), 586-597, 2014
1082014
Is arginine charged in a membrane?
L Li, I Vorobyov, AD MacKerell, TW Allen
Biophysical journal 94 (2), L11-L13, 2008
1072008
Local anesthetic and antiepileptic drug access and binding to a bacterial voltage-gated sodium channel
C Boiteux, I Vorobyov, RJ French, C French, V Yarov-Yarovoy, TW Allen
Proceedings of the National Academy of Sciences 111 (36), 13057-13062, 2014
1062014
Glycero-versus sphingo-phospholipids: correlations with human and non-human mammalian lens growth
MC Yappert, M Rujoi, D Borchman, I Vorobyov, R Estrada
Experimental eye research 76 (6), 725-734, 2003
1002003
Atomistic simulations of membrane ion channel conduction, gating, and modulation
E Flood, C Boiteux, B Lev, I Vorobyov, TW Allen
Chemical Reviews 119 (13), 7737-7832, 2019
972019
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