R. David Hawkins
R. David Hawkins
Associate Professor of Medical Genetics and Genome Sciences, University of Washington
Verified email at uw.edu - Homepage
TitleCited byYear
Human DNA methylomes at base resolution show widespread epigenomic differences
R Lister, M Pelizzola, RH Dowen, RD Hawkins, G Hon, J Tonti-Filippini, ...
nature 462 (7271), 315, 2009
37222009
Integrative analysis of 111 reference human epigenomes
A Kundaje, W Meuleman, J Ernst, M Bilenky, A Yen, A Heravi-Moussavi, ...
Nature 518 (7539), 317, 2015
27532015
Distinct and predictive chromatin signatures of transcriptional promoters and enhancers in the human genome
ND Heintzman, RK Stuart, G Hon, Y Fu, CW Ching, RD Hawkins, ...
Nature genetics 39 (3), 311, 2007
27222007
Histone modifications at human enhancers reflect global cell-type-specific gene expression
ND Heintzman, GC Hon, RD Hawkins, P Kheradpour, A Stark, LF Harp, ...
Nature 459 (7243), 108, 2009
20372009
Hotspots of aberrant epigenomic reprogramming in human induced pluripotent stem cells
R Lister, M Pelizzola, YS Kida, RD Hawkins, JR Nery, G Hon, ...
Nature 471 (7336), 68, 2011
14422011
Distinct epigenomic landscapes of pluripotent and lineage-committed human cells
RD Hawkins, GC Hon, LK Lee, QM Ngo, R Lister, M Pelizzola, LE Edsall, ...
Cell stem cell 6 (5), 479-491, 2010
6842010
Next-generation genomics: an integrative approach
RD Hawkins, GC Hon, B Ren
Nature Reviews Genetics 11 (7), 476, 2010
6142010
Comparison of sequencing-based methods to profile DNA methylation and identification of monoallelic epigenetic modifications
RA Harris, T Wang, C Coarfa, RP Nagarajan, C Hong, SL Downey, ...
Nature biotechnology 28 (10), 1097, 2010
5832010
Epigenomic analysis of multilineage differentiation of human embryonic stem cells
W Xie, MD Schultz, R Lister, Z Hou, N Rajagopal, P Ray, JW Whitaker, ...
Cell 153 (5), 1134-1148, 2013
4892013
Global DNA hypomethylation coupled to repressive chromatin domain formation and gene silencing in breast cancer
GC Hon, RD Hawkins, OL Caballero, C Lo, R Lister, M Pelizzola, ...
Genome research 22 (2), 246-258, 2012
3852012
Derivation of naive human embryonic stem cells
CB Ware, AM Nelson, B Mecham, J Hesson, W Zhou, EC Jonlin, ...
Proceedings of the National Academy of Sciences 111 (12), 4484-4489, 2014
3502014
An assessment of histone-modification antibody quality
TA Egelhofer, A Minoda, S Klugman, K Lee, P Kolasinska-Zwierz, ...
Nature structural & molecular biology 18 (1), 91, 2011
3372011
Role of the histone H3 lysine 4 methyltransferase, SET7/9, in the regulation of NF-κB-dependent inflammatory genes relevance to diabetes and inflammation
Y Li, MA Reddy, F Miao, N Shanmugam, JK Yee, D Hawkins, B Ren, ...
Journal of Biological Chemistry 283 (39), 26771-26781, 2008
2702008
Predictive chromatin signatures in the mammalian genome
GC Hon, RD Hawkins, B Ren
Human molecular genetics 18 (R2), R195-R201, 2009
2282009
The metabolome regulates the epigenetic landscape during naive-to-primed human embryonic stem cell transition
H Sperber, J Mathieu, Y Wang, A Ferreccio, J Hesson, Z Xu, KA Fischer, ...
Nature cell biology 17 (12), 1523, 2015
1842015
Muscle-specific CRISPR/Cas9 dystrophin gene editing ameliorates pathophysiology in a mouse model for Duchenne muscular dystrophy
NE Bengtsson, JK Hall, GL Odom, MP Phelps, CR Andrus, RD Hawkins, ...
Nature communications 8, 14454, 2017
1692017
Systematic evaluation of variability in ChIP-chip experiments using predefined DNA targets
DS Johnson, W Li, DB Gordon, A Bhattacharjee, B Curry, J Ghosh, ...
Genome research 18 (3), 393-403, 2008
1542008
Genome-wide profiling of interleukin-4 and STAT6 transcription factor regulation of human Th2 cell programming
LL Elo, H Järvenpää, S Tuomela, S Raghav, H Ahlfors, K Laurila, B Gupta, ...
Immunity 32 (6), 852-862, 2010
1182010
Genetic variability overrides the impact of parental cell type and determines iPSC differentiation potential
A Kyttälä, R Moraghebi, C Valensisi, J Kettunen, C Andrus, ...
Stem cell reports 6 (2), 200-212, 2016
1132016
Dynamic chromatin states in human ES cells reveal potential regulatory sequences and genes involved in pluripotency
RD Hawkins, GC Hon, C Yang, JE Antosiewicz-Bourget, LK Lee, QM Ngo, ...
Cell research 21 (10), 1393, 2011
932011
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