SARS-CoV-2 genomic diversity and the implications for qRT-PCR diagnostics and transmission N Sapoval, M Mahmoud, MD Jochum, Y Liu, RAL Elworth, Q Wang, ... Genome research 31 (4), 635-644, 2021 | 33 | 2021 |
SeqScreen: accurate and sensitive functional screening of pathogenic sequences via ensemble learning A Balaji, B Kille, AD Kappell, GD Godbold, M Diep, RAL Elworth, Z Qian, ... Genome biology 23 (1), 133, 2022 | 26 | 2022 |
Hidden genomic diversity of SARS-CoV-2: implications for qRT-PCR diagnostics and transmission N Sapoval, M Mahmoud, MD Jochum, Y Liu, RAL Elworth, Q Wang, ... BioRxiv, 2020 | 24 | 2020 |
An evolutionarily conserved RNA structure in the functional core of the lincRNA Cyrano AN Jones, G Pisignano, T Pavelitz, J White, M Kinisu, N Forino, D Albin, ... Rna 26 (9), 1234-1246, 2020 | 19 | 2020 |
Structure of the RNA specialized translation initiation element that recruits eIF3 to the 5′-UTR of c-Jun MJ Walker, MD Shortridge, DD Albin, LY Cominsky, G Varani Journal of molecular biology 432 (7), 1841-1855, 2020 | 18 | 2020 |
SeqScreen: a biocuration platform for robust taxonomic and biological process characterization of nucleic acid sequences of interest D Albin, D Nasko, RAL Elworth, J Lu, A Balaji, C Diaz, N Shah, J Selengut, ... 2019 IEEE international conference on bioinformatics and biomedicine (BIBM …, 2019 | 10 | 2019 |
An international virtual hackathon to build tools for the analysis of structural variants within species ranging from coronaviruses to vertebrates AM Mc Cartney, M Mahmoud, M Jochum, DP Agustinho, B Zorman, ... F1000Research 10, 2021 | 4 | 2021 |
TCDD exposure alters fecal IgA concentrations in male and female mice CL Foxx, MR Nagy, AE King, D Albin, GK DeKrey BMC Pharmacology and Toxicology 23 (1), 25, 2022 | 3 | 2022 |
PhageBox: An Open Source Digital Microfluidic Extension With Applications for Phage Discovery D Albin, L Buecherl, E Kochavi, E Niehaus, S Novack, S Uragoda, ... IEEE Transactions on Biomedical Engineering, 2023 | 2 | 2023 |
PhageScanner, a flexible machine learning pipeline for automated bacteriophage genomic and metagenomic feature annotation DD Albin, M Alistar bioRxiv, 2023.07. 17.549438, 2023 | 1 | 2023 |
The Phage Toolbox: Automating Phage Discovery Using Novel Software, Devices, and High-Throughput Methodology D Albin University of Colorado at Boulder, 2023 | | 2023 |
Methods developed during the first National Center for Biotechnology Information Structural Variation Codeathon at Baylor College of Medicine M Mahmoud, AR Gener, MM Khayat, AC English, A Balaji, A Zhou, ... F1000Research 9 (1141), 1141, 2020 | | 2020 |
Hidden genomic diversity of SARS-CoV-2: implications for qRT-PCR diagnostics and transmission (preprint) N Sapoval, M Mahmoud, MD Jochum, Y Liu, RAL Elworth, Q Wang, ... | | 2020 |
A Novel Computational Platform for Sensitive, Accurate, and Efficient Screening of Nucleic Acids D Albin Rice University, 2020 | | 2020 |
Immunohistochemical Analysis of Co-localization Between the FP Receptor and Endothelial Cells in the Bovine Corpus Luteum D Albin University of Northern Colorado, 2017 | | 2017 |