Peter Haverty
Peter Haverty
Staff Bioinformatics Engineer, Zymergen Inc.
Verified email at
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Diverse somatic mutation patterns and pathway alterations in human cancers
Z Kan, BS Jaiswal, J Stinson, V Janakiraman, D Bhatt, HM Stern, P Yue, ...
Nature 466 (7308), 869-873, 2010
Recurrent R-spondin fusions in colon cancer
S Seshagiri, EW Stawiski, S Durinck, Z Modrusan, EE Storm, CB Conboy, ...
Nature 488 (7413), 660-664, 2012
Comprehensive genomic analysis identifies SOX2 as a frequently amplified gene in small-cell lung cancer
CM Rudin, S Durinck, EW Stawiski, JT Poirier, Z Modrusan, DS Shames, ...
Nature genetics 44 (10), 1111-1116, 2012
The mutation spectrum revealed by paired genome sequences from a lung cancer patient
W Lee, Z Jiang, J Liu, PM Haverty, Y Guan, J Stinson, P Yue, Y Zhang, ...
Nature 465 (7297), 473-477, 2010
A compendium of gene expression in normal human tissues
LL Hsiao, F Dangond, T Yoshida, R Hong, RV Jensen, J Misra, W Dillon, ...
Physiological genomics 7 (2), 97-104, 2001
A comprehensive transcriptional portrait of human cancer cell lines
C Klijn, S Durinck, EW Stawiski, PM Haverty, Z Jiang, H Liu, J Degenhardt, ...
Nature biotechnology 33 (3), 306-312, 2015
Genomic analysis of smoothened inhibitor resistance in basal cell carcinoma
HJ Sharpe, G Pau, GJ Dijkgraaf, N Basset-Seguin, Z Modrusan, ...
Cancer cell 27 (3), 327-341, 2015
Spectrum of diverse genomic alterations define non–clear cell renal carcinoma subtypes
S Durinck, EW Stawiski, A Pavía-Jiménez, Z Modrusan, P Kapur, ...
Nature genetics 47 (1), 13, 2015
Synovial phenotypes in rheumatoid arthritis correlate with response to biologic therapeutics
G Dennis, CTJ Holweg, SK Kummerfeld, DF Choy, AF Setiadi, ...
Arthritis research & therapy 16 (2), 1-18, 2014
The effects of hepatitis B virus integration into the genomes of hepatocellular carcinoma patients
Z Jiang, S Jhunjhunwala, J Liu, PM Haverty, MI Kennemer, Y Guan, ...
Genome research 22 (4), 593-601, 2012
ERK inhibition overcomes acquired resistance to MEK inhibitors
G Hatzivassiliou, B Liu, C O'Brien, JM Spoerke, KP Hoeflich, PM Haverty, ...
Molecular cancer therapeutics 11 (5), 1143-1154, 2012
Targeting p21-activated kinase 1 (PAK1) to induce apoptosis of tumor cells
CC Ong, AM Jubb, PM Haverty, W Zhou, V Tran, T Truong, H Turley, ...
Proceedings of the National Academy of Sciences 108 (17), 7177-7182, 2011
Genome and transcriptome sequencing of lung cancers reveal diverse mutational and splicing events
J Liu, W Lee, Z Jiang, Z Chen, S Jhunjhunwala, PM Haverty, F Gnad, ...
Genome research 22 (12), 2315-2327, 2012
Reproducible pharmacogenomic profiling of cancer cell line panels
PM Haverty, E Lin, J Tan, Y Yu, B Lam, S Lianoglou, RM Neve, S Martin, ...
Nature 533 (7603), 333-337, 2016
High‐resolution genomic and expression analyses of copy number alterations in breast tumors
PM Haverty, J Fridlyand, L Li, G Getz, R Beroukhim, S Lohr, TD Wu, ...
Genes, Chromosomes and Cancer 47 (6), 530-542, 2008
Phosphoinositide 3-kinase (PI3K) pathway alterations are associated with histologic subtypes and are predictive of sensitivity to PI3K inhibitors in lung cancer preclinical models
JM Spoerke, C O'Brien, L Huw, H Koeppen, J Fridlyand, RK Brachmann, ...
Clinical cancer research 18 (24), 6771-6783, 2012
Distinguishing cancer-associated missense mutations from common polymorphisms
JS Kaminker, Y Zhang, A Waugh, PM Haverty, B Peters, D Sebisanovic, ...
Cancer research 67 (2), 465-473, 2007
Suppression of HER2/HER3-mediated growth of breast cancer cells with combinations of GDC-0941 PI3K inhibitor, trastuzumab, and pertuzumab
E Yao, W Zhou, ST Lee-Hoeflich, T Truong, PM Haverty, ...
Clinical Cancer Research 15 (12), 4147-4156, 2009
Computational inference of transcriptional regulatory networks from expression profiling and transcription factor binding site identification
PM Haverty, U Hansen, Z Weng
Nucleic acids research 32 (1), 179-188, 2004
Enhancer activity requires CBP/P300 bromodomain-dependent histone H3K27 acetylation
R Raisner, S Kharbanda, L Jin, E Jeng, E Chan, M Merchant, PM Haverty, ...
Cell reports 24 (7), 1722-1729, 2018
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