Yad Ghavi-Helm
Yad Ghavi-Helm
Post-doc, EMBL
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Cited by
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Tissue-specific analysis of chromatin state identifies temporal signatures of enhancer activity during embryonic development
S Bonn, RP Zinzen, C Girardot, EH Gustafson, A Perez-Gonzalez, ...
Nature genetics 44 (2), 148-156, 2012
Enhancer loops appear stable during development and are associated with paused polymerase
Y Ghavi-Helm, FA Klein, T Pakozdi, L Ciglar, D Noordermeer, W Huber, ...
Nature 512 (7512), 96-100, 2014
Multigenome analysis identifies a worldwide distributed epidemic Legionella pneumophila clone that emerged within a highly diverse species
C Cazalet, S Jarraud, Y Ghavi-Helm, F Kunst, P Glaser, J Etienne, ...
Genome research 18 (3), 431-441, 2008
Mediator-dependent recruitment of TFIIH modules in preinitiation complex
C Esnault, Y Ghavi-Helm, S Brun, J Soutourina, N Van Berkum, ...
Molecular cell 31 (3), 337-346, 2008
Highly rearranged chromosomes reveal uncoupling between genome topology and gene expression
Y Ghavi-Helm, A Jankowski, S Meiers, RR Viales, JO Korbel, ...
Nature genetics 51 (8), 1272-1282, 2019
FourCSeq: analysis of 4C sequencing data
FA Klein, T Pakozdi, S Anders, Y Ghavi-Helm, EEM Furlong, W Huber
Bioinformatics 31 (19), 3085-3091, 2015
Genomic binding of Pol III transcription machinery and relationship with TFIIS transcription factor distribution in mouse embryonic stem cells
L Carriere, S Graziani, O Alibert, Y Ghavi-Helm, F Boussouar, ...
Nucleic acids research 40 (1), 270-283, 2012
Genome-wide location analysis reveals a role of TFIIS in RNA polymerase III transcription
Y Ghavi-Helm, M Michaut, J Acker, JC Aude, P Thuriaux, M Werner, ...
Genes & development 22 (14), 1934-1947, 2008
Dual functionality of cis-regulatory elements as developmental enhancers and Polycomb response elements
J Erceg, T Pakozdi, R Marco-Ferreres, Y Ghavi-Helm, C Girardot, ...
Genes & development 31 (6), 590-602, 2017
Mutations of RNA polymerase II activate key genes of the nucleoside triphosphate biosynthetic pathways
M Kwapisz, M Wery, D Despres, Y Ghavi‐Helm, J Soutourina, P Thuriaux, ...
The EMBO journal 27 (18), 2411-2421, 2008
Chromosome topology guides the Drosophila Dosage Compensation Complex for target gene activation
T Schauer, Y Ghavi‐Helm, T Sexton, C Albig, C Regnard, G Cavalli, ...
EMBO reports 18 (10), 1854-1868, 2017
Wilczyn ski B, Riddell A, Furlong EE. 2012. Tissue-specific analysis of chromatin state identifies temporal signatures of enhancer activity during embryonic development
S Bonn, RP Zinzen, C Girardot, EH Gustafson, A Perez-Gonzalez, ...
Nature Genetics 44, 148-156, 0
Analyzing transcription factor occupancy during embryo development using ChIP-seq
Y Ghavi-Helm, EEM Furlong
Gene Regulatory Networks, 229-245, 2012
m6A RNA methylation regulates promoter-proximal pausing of RNA polymerase II
J Akhtar, Y Renaud, S Albrecht, Y Ghavi-Helm, JY Roignant, M Silies, ...
Molecular Cell 81 (16), 3356-3367. e6, 2021
PHD and TFIIS-Like domains of the Bye1 transcription factor determine its multivalent genomic distribution
M Pinskaya, Y Ghavi-Helm, S Mariotte-Labarre, A Morillon, J Soutourina, ...
PloS one 9 (7), e102464, 2014
Chromatin Immunoprecipitation for Analyzing Transcription Factor Binding and Histone Modifications in Drosophila
Y Ghavi-Helm, B Zhao, EEM Furlong
Drosophila, 263-277, 2016
Functional consequences of chromosomal rearrangements on gene expression: not so deleterious after all?
Y Ghavi-Helm
Journal of Molecular Biology 432 (3), 665-675, 2020
Zeb1 represses TCR signaling, promotes the proliferation of T cell progenitors and is essential for NK1. 1+ T cell development
J Zhang, M Wencker, Q Marliac, A Berton, U Hasan, R Schneider, ...
Cellular & Molecular Immunology 18 (9), 2140-2152, 2021
3D genome organisation in Drosophila
C Moretti, I StÚvant, Y Ghavi-Helm
Briefings in functional genomics 19 (2), 92-100, 2020
Sequential actions of EOMES and T-BET promote stepwise maturation of natural killer cells
J Zhang, S Le Gras, K Pouxvielh, F Faure, L Fallone, N Kern, M Moreews, ...
Nature communications 12 (1), 1-17, 2021
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