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Timothy A. Johnson
Timothy A. Johnson
Purdue University, Animal Sciences
Verified email at purdue.edu
Title
Cited by
Cited by
Year
Diverse and abundant antibiotic resistance genes in Chinese swine farms
YG Zhu, TA Johnson, JQ Su, M Qiao, GX Guo, RD Stedtfeld, ...
Proceedings of the National Academy of Sciences 110 (9), 3435-3440, 2013
23412013
CARD 2017: expansion and model-centric curation of the comprehensive antibiotic resistance database
B Jia, AR Raphenya, B Alcock, N Waglechner, P Guo, KK Tsang, BA Lago, ...
Nucleic acids research, gkw1004, 2016
21572016
In-feed antibiotic effects on the swine intestinal microbiome
T Looft, TA Johnson, HK Allen, DO Bayles, DP Alt, RD Stedtfeld, WJ Sul, ...
Proceedings of the National Academy of Sciences 109 (5), 1691-1696, 2012
11152012
High-throughput quantification of antibiotic resistance genes from an urban wastewater treatment plant
A Karkman, TA Johnson, C Lyra, RD Stedtfeld, M Tamminen, JM Tiedje, ...
FEMS microbiology ecology 92 (3), fiw014, 2016
2282016
Clusters of antibiotic resistance genes enriched together stay together in swine agriculture
TA Johnson, RD Stedtfeld, Q Wang, JR Cole, SA Hashsham, T Looft, ...
MBio 7 (2), 10.1128/mbio. 02214-15, 2016
1872016
Aquaculture changes the profile of antibiotic resistance and mobile genetic element associated genes in Baltic Sea sediments
WI Muziasari, K Pärnänen, TA Johnson, C Lyra, A Karkman, RD Stedtfeld, ...
FEMS microbiology ecology 92 (4), fiw052, 2016
1812016
Comparison of the specificities and efficacies of primers for aromatic dioxygenase gene analysis of environmental samples
S Iwai, TA Johnson, B Chai, SA Hashsham, JM Tiedje
Applied and environmental microbiology 77 (11), 3551-3557, 2011
902011
Functional genes to assess nitrogen cycling and aromatic hydrocarbon degradation: primers and processing matter
CR Penton, TA Johnson, JF Quensen III, S Iwai, JR Cole, JM Tiedje
Frontiers in microbiology 4, 279, 2013
862013
Swine growth promotion with antibiotics or alternatives can increase antibiotic resistance gene mobility potential
J Muurinen, J Richert, CL Wickware, B Richert, TA Johnson
Scientific reports 11 (1), 5485, 2021
572021
Dietary fiber hierarchical specificity: The missing link for predictable and strong shifts in gut bacterial communities
TM Cantu-Jungles, N Bulut, E Chambry, A Ruthes, M Iacomini, ...
MBio 12 (3), 10.1128/mbio. 01028-21, 2021
442021
The in-feed antibiotic carbadox induces phage gene transcription in the swine gut microbiome
TA Johnson, T Looft, AJ Severin, DO Bayles, DJ Nasko, KE Wommack, ...
MBio 8 (4), 10.1128/mbio. 00709-17, 2017
412017
Antimicrobial resistance dashboard application for mapping environmental occurrence and resistant pathogens
RD Stedtfeld, MR Williams, U Fakher, TA Johnson, TM Stedtfeld, F Wang, ...
FEMS microbiology ecology 92 (3), fiw020, 2016
412016
In-feed bacitracin methylene disalicylate modulates the turkey microbiota and metabolome in a dose-dependent manner
TA Johnson, MJ Sylte, T Looft
Scientific reports 9 (1), 8212, 2019
382019
Sphingomonas wittichii Strain RW1 Genome-Wide Gene Expression Shifts in Response to Dioxins and Clay
B Chai, TV Tsoi, S Iwai, C Liu, JA Fish, C Gu, TA Johnson, G Zylstra, ...
PLoS One 11 (6), e0157008, 2016
352016
On-farm colorimetric detection of Pasteurella multocida, Mannheimia haemolytica, and Histophilus somni in crude bovine nasal samples
A Pascual-Garrigos, MK Maruthamuthu, A Ault, JL Davidson, G Rudakov, ...
Veterinary research 52, 1-12, 2021
322021
Composition and diversity of the preputial microbiota in healthy bulls
CL Wickware, TA Johnson, JH Koziol
Theriogenology 145, 231-237, 2020
282020
Identification of bovine respiratory disease through the nasal microbiome
RE Centeno-Martinez, N Glidden, S Mohan, JL Davidson, ...
Animal microbiome 4 (1), 15, 2022
252022
Composition and diversity of the seminal microbiota in bulls and its association with semen parameters
JH Koziol, T Sheets, CL Wickware, TA Johnson
Theriogenology 182, 17-25, 2022
212022
Loop-Mediated Isothermal Amplification for the Detection of Pasteurella multocida, Mannheimia haemolytica, and Histophilus somni in Bovine Nasal Samples
S Mohan, A Pascual-Garrigos, H Brouwer, D Pillai, J Koziol, A Ault, ...
ACS Agricultural Science & Technology 1 (2), 100-108, 2021
182021
Evaluation of nucleic acid isothermal amplification methods for human clinical microbial infection detection
BE Etchebarne, Z Li, RD Stedtfeld, MC Nicholas, MR Williams, ...
Frontiers in Microbiology 8, 2211, 2017
182017
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