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Kris Popendorf
Kris Popendorf
Verified email at dna.bio.keio.ac.jp
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Cited by
Year
Chickens possess centromeres with both extended tandem repeats and short non-tandem-repetitive sequences
WH Shang, T Hori, A Toyoda, J Kato, K Popendorf, Y Sakakibara, ...
Genome research 20 (9), 1219-1228, 2010
1872010
Whole genome assembly of a natto production strain Bacillus subtilis natto from very short read data
Y Nishito, Y Osana, T Hachiya, K Popendorf, A Toyoda, A Fujiyama, ...
BMC genomics 11, 1-12, 2010
1272010
Accurate identification of orthologous segments among multiple genomes
T Hachiya, Y Osana, K Popendorf, Y Sakakibara
Bioinformatics 25 (7), 853-860, 2009
482009
Murasaki: a fast, parallelizable algorithm to find anchors from multiple genomes
K Popendorf, H Tsuyoshi, Y Osana, Y Sakakibara
PloS one 5 (9), e12651, 2010
402010
Stem kernels for RNA sequence analyses
Y Sakakibara, K Popendorf, N Ogawa, K Asai, K Sato
Journal of bioinformatics and computational biology 5 (05), 1103-1122, 2007
302007
COPICAT: a software system for predicting interactions between proteins and chemical compounds
Y Sakakibara, T Hachiya, M Uchida, N Nagamine, Y Sugawara, M Yokota, ...
Bioinformatics 28 (5), 745-746, 2012
222012
A prospective evaluation of AI-augmented epidemiology to forecast COVID-19 in the USA and Japan
SÖ Arık, J Shor, R Sinha, J Yoon, JR Ledsam, LT Le, MW Dusenberry, ...
NPJ digital medicine 4 (1), 146, 2021
182021
SAMSCOPE: an OpenGL-based real-time interactive scale-free SAM viewer
K Popendorf, Y Sakakibara
Bioinformatics 28 (9), 1276-1277, 2012
92012
Murasaki-homology detection across multiple large-scale genomes
K Popendorf
Fifth Annual RECOMB Satellite Workshop on Comparative Genomics, San Diego …, 2007
82007
Symmetric Publish/Subscribe via Constraint Publication.
A Tomasic, C Garrod, K Popendorf
ExpDB, 21-27, 2006
82006
Development of a large-scale comparative genome system and its application to the analysis of mycobacteria genomes
Y Sakakibara, Y Osana, K Popendorf
Nihon Hansenbyo Gakkai Zasshi= Japanese Journal of Leprosy: Official Organ …, 2007
62007
A prospective evaluation of AI-augmented epidemiology to forecast COVID-19 in the USA and Japan
J Ledsam, S Arik, J Shor, R Sinha, J Yoon, L Le, M Dusenberry, N Yoder, ...
12021
On the evaluation of symmetric publish/subscribe
A Tomasic, C Garrod, K Popendorf
ExpDB: First International Workshop on Performance and Evaluation of Data …, 2006
12006
A prospective evaluation of AI-augmented epidemiology to forecast COVID-19 in the USA and Japan (preprint)
J Ledsam, S Arik, J Shor, R Sinha, J Yoon, L Le, M Dusenberry, N Yoder, ...
2021
Chickens possess centromeres with both extended tandem repeats and short non-tandem-repetitive sequences.
SWH Shang WeiHao, T Hori, A Toyoda, J Kato, K Popendorf, ...
2010
The chicken genome has a hybrid centromere model, involving either long arrays of tandem repeats on some chromosomes or relative short spans of non-tandem-repeat sequences on …
WH Shang, T Hori, A Toyoda, J Kato, K Popendorf, Y Sakakibara, ...
Genome Research, gr. 106245.110, 2010
2010
Research article Whole genome assembly of a natto production strain Bacillus subtilis natto from very short read data
Y Nishito, Y Osana, T Hachiya, K Popendorf, A Toyoda, A Fujiyama, ...
2010
比較ゲノム解析システムの開発とマイコバクテリアゲノムへの応用
榊原康文, 長名保範
日本ハンセン病学会雑誌 76 (3), 251-256, 2007
2007
Symmetric Publish/Subscribe via Constraint
A Tomasic, C Garrod, K Popendorf
2006
COPICAT: A Software System for Predicting Interactions Between Chemical Compounds and Proteins by Using Two-Layer Support Vector Machine
M Yokota, N Nagamine, Y Sugawara, K Popendorf, M Uchida, T Kitahashi, ...
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