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Gavin R. Oliver
Gavin R. Oliver
Assistant Professor of Biomedical Informatics, Associate in Health Sciences Research, Mayo Clinic
Verified email at mayo.edu
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Cited by
Cited by
Year
Integrated genomic characterization reveals novel, therapeutically relevant drug targets in FGFR and EGFR pathways in sporadic intrahepatic cholangiocarcinoma
MJ Borad, MD Champion, JB Egan, WS Liang, R Fonseca, AH Bryce, ...
PLoS genetics 10 (2), e1004135, 2014
3702014
Development and independent validation of a prognostic assay for stage II colon cancer using formalin-fixed paraffin-embedded tissue
RD Kennedy, M Bylesjo, P Kerr, T Davison, JM Black, EW Kay, RJ Holt, ...
Journal of Clinical Oncology 29 (35), 4620-4626, 2011
2402011
Distinct epigenetic landscapes underlie the pathobiology of pancreatic cancer subtypes
G Lomberk, Y Blum, R Nicolle, A Nair, KS Gaonkar, L Marisa, A Mathison, ...
Nature communications 9 (1), 1978, 2018
2362018
Bioinformatics for clinical next generation sequencing
GR Oliver, SN Hart, EW Klee
Clinical chemistry 61 (1), 124-135, 2015
2062015
Experience with precision genomics and tumor board, indicates frequent target identification, but barriers to delivery
AH Bryce, JB Egan, MJ Borad, AK Stewart, GS Nowakowski, ...
Oncotarget 8 (16), 27145, 2017
722017
The Hedgehog pathway as targetable vulnerability with 5-azacytidine in myelodysplastic syndrome and acute myeloid leukemia
R Tibes, A Al-Kali, GR Oliver, DH Delman, N Hansen, K Bhagavatula, ...
Journal of hematology & oncology 8, 1-10, 2015
622015
A smooth muscle tone‐dependent stretch‐activated migrating motor pattern in isolated guinea‐pig distal colon
TK Smith, GR Oliver, GW Hennig, DM O'Shea, PV Berghe, SH Kang, ...
The Journal of physiology 551 (3), 955-969, 2003
572003
LeafCutterMD: an algorithm for outlier splicing detection in rare diseases
G Jenkinson, YI Li, S Basu, MA Cousin, GR Oliver, EW Klee
Bioinformatics 36 (17), 4609-4615, 2020
522020
PatternCNV: a versatile tool for detecting copy number changes from exome sequencing data
C Wang, JM Evans, AV Bhagwate, N Prodduturi, V Sarangi, M Middha, ...
Bioinformatics 30 (18), 2678-2680, 2014
512014
Long-range transcriptome sequencing reveals cancer cell growth regulatory chimeric mRNA
R Plebani, GR Oliver, M Trerotola, E Guerra, P Cantanelli, L Apicella, ...
Neoplasia 14 (11), 1087-49, 2012
442012
Development and verification of an RNA sequencing (RNA-Seq) assay for the detection of gene fusions in tumors
JL Winters, JI Davila, AM McDonald, AA Nair, N Fadra, RN Wehrs, ...
The Journal of Molecular Diagnostics 20 (4), 495-511, 2018
422018
Impact of integrated translational research on clinical exome sequencing
EW Klee, MA Cousin, F Pinto e Vairo, JA Morales-Rosado, EL Macke, ...
Genetics in Medicine 23 (3), 498-507, 2021
412021
Identification of differentially expressed sense and antisense transcript pairs in breast epithelial tissues
A Grigoriadis, GR Oliver, A Tanney, H Kendrick, MJ Smalley, P Jat, ...
BMC genomics 10, 1-12, 2009
352009
Utility of DNA, RNA, protein, and functional approaches to solve cryptic immunodeficiencies
MA Cousin, MJ Smith, AN Sigafoos, JJ Jin, MI Murphree, NJ Boczek, ...
Journal of Clinical Immunology 38, 307-319, 2018
332018
COVID-19 mortality prediction from deep learning in a large multistate electronic health record and laboratory information system data set: Algorithm development and validation
S Sankaranarayanan, J Balan, JR Walsh, Y Wu, S Minnich, A Piazza, ...
Journal of medical Internet research 23 (9), e30157, 2021
302021
A tailored approach to fusion transcript identification increases diagnosis of rare inherited disease
GR Oliver, X Tang, LE Schultz-Rogers, N Vidal-Folch, WG Jenkinson, ...
PLoS One 14 (10), e0223337, 2019
302019
Generation of a non-small cell lung cancer transcriptome microarray
A Tanney, GR Oliver, V Farztdinov, RD Kennedy, JM Mulligan, CE Fulton, ...
BMC medical genomics 1, 1-12, 2008
272008
A novel Kleefstra syndrome-associated variant that affects the conserved TPLX motif within the ankyrin repeat of EHMT1 leads to abnormal protein folding
PR Blackburn, A Tischer, MT Zimmermann, JL Kemppainen, S Sastry, ...
Journal of Biological Chemistry 292 (9), 3866-3876, 2017
232017
Molecular modeling and molecular dynamic simulation of the effects of variants in the TGFBR2 kinase domain as a paradigm for interpretation of variants obtained by next …
MT Zimmermann, R Urrutia, GR Oliver, PR Blackburn, MA Cousin, ...
PLoS One 12 (2), e0170822, 2017
222017
Characterization of three ciliopathy pedigrees expands the phenotype associated with biallelic C2CD3 variants
NJ Boczek, K Hopp, L Benoit, D Kraft, MA Cousin, PR Blackburn, ...
European Journal of Human Genetics 26 (12), 1797-1809, 2018
202018
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