Sandeep Kaur
Sandeep Kaur
Phd student at CSE, UNSW and BioVis Center, Garvan Institute
Verified email at unsw.edu.au
Title
Cited by
Cited by
Year
Delineating community outbreaks of Salmonella enterica serovar Typhimurium by use of whole-genome sequencing: insights into genomic variability within an outbreak
S Octavia, Q Wang, MM Tanaka, S Kaur, V Sintchenko, R Lan
Journal of clinical microbiology 53 (4), 1063-1071, 2015
672015
Visualization of biomedical data
SI O'Donoghue, BF Baldi, SJ Clark, AE Darling, JM Hogan, S Kaur, ...
Annual Review of Biomedical Data Science 1, 275-304, 2018
322018
Genomic dissection of Australian Bordetella pertussis isolates from the 2008–2012 epidemic
A Safarchi, S Octavia, SZ Wu, S Kaur, V Sintchenko, GL Gilbert, N Wood, ...
Journal of Infection 72 (4), 468-477, 2016
252016
Visual analytics of phosphorylation time-series data on insulin response
DKG Ma, C Stolte, S Kaur, M Bain, SI O'Donoghue
AIP Conference Proceedings 1559 (1), 185-196, 2013
72013
Visualization and analysis of epiproteome dynamics
S Kaur, B Baldi, J Vuong, SI O'Donoghue
Journal of molecular biology 431 (8), 1519-1539, 2019
52019
Whole-genome sequencing and comparative genomic analysis of Bordetella pertussis isolates from the 2007–2008 epidemic in Israel
S Octavia, SZ Wu, S Kaur, L Valinsky, E Marva, J Moran-Gilad, R Lan
Journal of Infection 74 (2), 204-207, 2017
42017
Evaluating the effectiveness of color to convey alignment quality in macromolecular structures
J Heinrich, S Kaur, S O'Donoghue
2015 Big Data Visual Analytics (BDVA), 1-8, 2015
42015
Multilevel genome typing: genomics-guided scalable resolution typing of microbial pathogens
M Payne, S Kaur, Q Wang, D Hennessy, L Luo, S Octavia, MM Tanaka, ...
Eurosurveillance 25 (20), 1900519, 2020
32020
SARS-CoV-2 structural coverage map reveals state changes that disrupt host immunity
SI O’Donoghue, A Schafferhans, N Sikta, C Stolte, S Kaur, BK Ho, ...
bioRxiv, 2020
32020
Systematic modeling of SARS-CoV-2 protein structures
SI O'Donoghue, A Schafferhans, N Sikta, C Stolte, S Kaur, B Ho, ...
bioRxiv, 2020
32020
Versus—A tool for evaluating visualizations and image quality using a 2AFC methodology
J Vuong, S Kaur, J Heinrich, BK Ho, CJ Hammang, BF Baldi, ...
Visual Informatics 2 (4), 225-234, 2018
32018
Visual analytics of signalling pathways using time profiles
DKG Ma, C Stolte, S Kaur, M Bain, SI O’Donoghue
Signal and Image Analysis for Biomedical and Life Sciences, 3-22, 2015
22015
Temporal ordering of omics and multiomic events inferred from time-series data
S Kaur, T Peters, P Yang, L Luu, J Vuong, J Krycer, S O’Donoghue
npj Systems Biology and Applications 6 (22), 2020
12020
Elucidation of global and local epidemiology of Salmonella Enteritidis through multilevel genome typing
L Luo, M Payne, S Kaur, D Hu, L Cheney, S Octavia, Q Wang, MM Tanaka, ...
bioRxiv, 2020
12020
A benchmark dataset for analyzing and visualizing the dynamic epiproteome
S Kaur, B Baldi, J Vuong, SI O'Donoghue
Data in brief 25, 104000, 2019
12019
Comparative Phosphoproteomics of Classical Bordetellae Elucidates the Potential Role of Serine, Threonine and Tyrosine Phosphorylation in Bordetella Biology and Virulence
LDW Luu, L Zhong, S Kaur, MJ Raftery, R Lan
Frontiers in Cellular and Infection Microbiology 11, 262, 2021
2021
Cluster-specific gene markers enhance Shigella and Enteroinvasive Escherichia coli in silico serotyping
X Zhang, M Payne, T Nguyen, S Kaur, R Lan
bioRxiv, 2021
2021
Versus——使用 2AFC 方法评估可视化和图像质量的工具
J Vuong, S Kaur, J Heinrich, BK Ho, CJ Hammang, BF Baldi, ...
Visual Informatics 2 (4), 225-234, 2019
2019
Developing a Visual Analytics Tool for Large-Scale Proteomics Time-Series Data
J Vuong, C Stolte, S Kaur, S O'Donoghue
2016 Big Data Visual Analytics (BDVA), 1-2, 2016
2016
A Strategy for Modelling and Visualising Large-scale Proteomics Time-series Data
S Kaur, J Vuong, C Stolte, S O’Donoghue
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Articles 1–20