| Visualization of biomedical data SI O'Donoghue, BF Baldi, SJ Clark, AE Darling, JM Hogan, S Kaur, ... Annual Review of Biomedical Data Science 1, 275-304, 2018 | 92 | 2018 |
| Delineating community outbreaks of Salmonella enterica serovar Typhimurium by use of whole-genome sequencing: insights into genomic variability within an outbreak S Octavia, Q Wang, MM Tanaka, S Kaur, V Sintchenko, R Lan Journal of clinical microbiology 53 (4), 1063-1071, 2015 | 87 | 2015 |
| Genomic dissection of Australian Bordetella pertussis isolates from the 2008–2012 epidemic A Safarchi, S Octavia, SZ Wu, S Kaur, V Sintchenko, GL Gilbert, N Wood, ... Journal of Infection 72 (4), 468-477, 2016 | 46 | 2016 |
| SARS‐CoV‐2 structural coverage map reveals viral protein assembly, mimicry, and hijacking mechanisms SI O’Donoghue, A Schafferhans, N Sikta, C Stolte, S Kaur, BK Ho, ... Molecular systems biology 17 (9), e10079, 2021 | 27 | 2021 |
| Multilevel genome typing: genomics-guided scalable resolution typing of microbial pathogens M Payne, S Kaur, Q Wang, D Hennessy, L Luo, S Octavia, MM Tanaka, ... Eurosurveillance 25 (20), 1900519, 2020 | 22 | 2020 |
| Cluster-specific gene markers enhance Shigella and enteroinvasive Escherichia coli in silico serotyping X Zhang, M Payne, T Nguyen, S Kaur, R Lan Microbial genomics 7 (12), 000704, 2021 | 15 | 2021 |
| Versus—A tool for evaluating visualizations and image quality using a 2AFC methodology J Vuong, S Kaur, J Heinrich, BK Ho, CJ Hammang, BF Baldi, ... Visual Informatics 2 (4), 225-234, 2018 | 14 | 2018 |
| Temporal ordering of omics and multiomic events inferred from time-series data S Kaur, T Peters, P Yang, L Luu, J Vuong, J Krycer, S O’Donoghue npj Systems Biology and Applications 6 (22), 2020 | 13 | 2020 |
| Visualization and analysis of epiproteome dynamics S Kaur, B Baldi, J Vuong, SI O'Donoghue Journal of molecular biology 431 (8), 1519-1539, 2019 | 11 | 2019 |
| Improved Genomic Identification, Clustering, and Serotyping of Shiga Toxin-Producing Escherichia coli Using Cluster/Serotype-Specific Gene Markers X Zhang, M Payne, S Kaur, R Lan Frontiers in Cellular and Infection Microbiology 11, 772574, 2022 | 10 | 2022 |
| Elucidation of global and national genomic epidemiology of Salmonella enterica serovar Enteritidis through multilevel genome typing L Luo, M Payne, S Kaur, D Hu, L Cheney, S Octavia, Q Wang, MM Tanaka, ... Microbial Genomics 7 (7), 000605, 2021 | 9 | 2021 |
| SARS-CoV-2 structural coverage map reveals state changes that disrupt host immunity SI O’Donoghue, A Schafferhans, N Sikta, C Stolte, S Kaur, BK Ho, ... | 8 | 2020 |
| Whole-genome sequencing and comparative genomic analysis of Bordetella pertussis isolates from the 2007–2008 epidemic in Israel S Octavia, SZ Wu, S Kaur, L Valinsky, E Marva, J Moran-Gilad, R Lan Journal of Infection 74 (2), 204-207, 2017 | 8 | 2017 |
| Visual analytics of phosphorylation time-series data on insulin response DKG Ma, C Stolte, S Kaur, M Bain, SI O'Donoghue AIP Conference Proceedings 1559 (1), 185-196, 2013 | 7 | 2013 |
| Comparative Phosphoproteomics of Classical Bordetellae Elucidates the Potential Role of Serine, Threonine and Tyrosine Phosphorylation in Bordetella Biology … LDW Luu, L Zhong, S Kaur, MJ Raftery, R Lan Frontiers in cellular and infection microbiology 11, 660280, 2021 | 6 | 2021 |
| Multilevel genome typing describes short-and long-term vibrio cholerae molecular epidemiology L Cheney, M Payne, S Kaur, R Lan Msystems 6 (4), 10.1128/msystems. 00134-21, 2021 | 5 | 2021 |
| Evaluating the effectiveness of color to convey alignment quality in macromolecular structures J Heinrich, S Kaur, S O'Donoghue 2015 Big Data Visual Analytics (BDVA), 1-8, 2015 | 5 | 2015 |
| MGTdb: a web service and database for studying the global and local genomic epidemiology of bacterial pathogens S Kaur, M Payne, L Luo, S Octavia, MM Tanaka, V Sintchenko, R Lan Database 2022, baac094, 2022 | 4 | 2022 |
| Systematic modeling of SARS-CoV-2 protein structures SI O’Donoghue, A Schafferhans, N Sikta, C Stolte, S Kaur, B Ho, ... bioRxiv, 2020.07. 16.207308, 2020 | 3 | 2020 |
| Genomic epidemiology and multilevel genome typing of Australian Salmonella enterica serovar Enteritidis L Luo, M Payne, Q Wang, S Kaur, IU Rathnayake, R Graham, M Gall, ... Microbiology Spectrum 11 (1), e03014-22, 2023 | 2 | 2023 |
