Gert Thijs
Gert Thijs
Verified email at agilent.com
Title
Cited by
Cited by
Year
PlantCARE, a database of plant cis-acting regulatory elements and a portal to tools for in silico analysis of promoter sequences
M Lescot, P Déhais, G Thijs, K Marchal, Y Moreau, Y Van de Peer, ...
Nucleic acids research 30 (1), 325-327, 2002
28262002
Assessing computational tools for the discovery of transcription factor binding sites
M Tompa, N Li, TL Bailey, GM Church, B De Moor, E Eskin, AV Favorov, ...
Nature biotechnology 23 (1), 137-144, 2005
15102005
A higher-order background model improves the detection of promoter regulatory elements by Gibbs sampling
G Thijs, M Lescot, K Marchal, S Rombauts, B De Moor, P Rouze, ...
Bioinformatics 17 (12), 1113-1122, 2001
5272001
A higher-order background model improves the detection of promoter regulatory elements by Gibbs sampling
G Thijs, M Lescot, K Marchal, S Rombauts, B De Moor, P Rouze, ...
Bioinformatics 17 (12), 1113-1122, 2001
5272001
A Gibbs sampling method to detect over-represented motifs in the upstream regions of co-expressed genes
G Thijs, K Marchal, M Lescot, S Rombauts, B De Moor, P Rouzé, ...
Proceedings of the fifth annual international conference on Computational …, 2001
4862001
Adaptive quality-based clustering of gene expression profiles
F De Smet, J Mathys, K Marchal, G Thijs, B De Moor, Y Moreau
Bioinformatics 18 (5), 735-746, 2002
2642002
Toucan: deciphering the cis ‐regulatory logic of coregulated genes
S Aerts, G Thijs, B Coessens, M Staes, Y Moreau, BD Moor
Nucleic acids research 31 (6), 1753-1764, 2003
2382003
TOUCAN 2: the all-inclusive open source workbench for regulatory sequence analysis
S Aerts, P Van Loo, G Thijs, H Mayer, R De Martin, Y Moreau, B De Moor
Nucleic acids research 33 (suppl_2), W393-W396, 2005
1792005
Computational detection of cis -regulatory modules
S Aerts, P Van Loo, G Thijs, Y Moreau, B De Moor
Bioinformatics 19 (suppl_2), ii5-ii14, 2003
1632003
INCLUSive: integrated clustering, upstream sequence retrieval and motif sampling
G Thijs, Y Moreau, F De Smet, J Mathys, M Lescot, S Rombauts, P Rouze, ...
Bioinformatics 18 (2), 331-332, 2002
972002
Pharao: pharmacophore alignment and optimization
J Taminau, G Thijs, H De Winter
Journal of Molecular Graphics and Modelling 27 (2), 161-169, 2008
822008
Comprehensive analysis of the base composition around the transcription start site in Metazoa
S Aerts, G Thijs, M Dabrowski, Y Moreau, B De Moor
BMC genomics 5 (1), 1-10, 2004
822004
In silico identification and experimental validation of PmrAB targets in Salmonella typhimurium by regulatory motif detection
K Marchal, S De Keersmaecker, P Monsieurs, N van Boxel, K Lemmens, ...
Genome biology 5 (2), 1-20, 2004
672004
Functional bioinformatics of microarray data: from expression to regulation
Y Moreau, F De Smet, G Thijs, K Marchal, B De Moor
Proceedings of the IEEE 90 (11), 1722-1743, 2002
662002
INCLUSive: A web portal and service registry for microarray and regulatory sequence analysis
B Coessens, G Thijs, S Aerts, K Marchal, F De Smet, K Engelen, ...
Nucleic Acids Research 31 (13), 3468-3470, 2003
632003
Genome-specific higher-order background models to improve motif detection
K Marchal, G Thijs, S De Keersmaecker, P Monsieurs, B De Moor, ...
Trends in microbiology 11 (2), 61-66, 2003
502003
More robust detection of motifs in coexpressed genes by using phylogenetic information
P Monsieurs, G Thijs, AA Fadda, SCJ De Keersmaecker, J Vanderleyden, ...
BMC bioinformatics 7 (1), 1-15, 2006
252006
A novel approach to identifying regulatory motifs in distantly related genomes
R Van Hellemont, P Monsieurs, G Thijs, B De Moor, Y Van de Peer, ...
Genome biology 6 (13), 1-18, 2005
192005
Somatic tumor variant filtration strategies to optimize tumor-only molecular profiling using targeted next-generation sequencing panels
MA Sukhai, M Misyura, M Thomas, S Garg, T Zhang, N Stickle, C Virtanen, ...
The Journal of Molecular Diagnostics 21 (2), 261-273, 2019
152019
Probabilistic methods to search for regulatory elements in sets of coregulated genes
G Thijs
Leuven: Faculty of Applied Sciences, Katholieke Universiteit Leuven, 2003
122003
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Articles 1–20