| PlantCARE, a database of plant cis-acting regulatory elements and a portal to tools for in silico analysis of promoter sequences M Lescot, P Déhais, G Thijs, K Marchal, Y Moreau, Y Van de Peer, ... Nucleic acids research 30 (1), 325-327, 2002 | 2741 | 2002 |
| Assessing computational tools for the discovery of transcription factor binding sites M Tompa, N Li, TL Bailey, GM Church, B De Moor, E Eskin, AV Favorov, ... Nature biotechnology 23 (1), 137-144, 2005 | 1504 | 2005 |
| A higher-order background model improves the detection of promoter regulatory elements by Gibbs sampling G Thijs, M Lescot, K Marchal, S Rombauts, B De Moor, P Rouze, ... Bioinformatics 17 (12), 1113-1122, 2001 | 526 | 2001 |
| A higher-order background model improves the detection of promoter regulatory elements by Gibbs sampling G Thijs, M Lescot, K Marchal, S Rombauts, B De Moor, P Rouze, ... Bioinformatics 17 (12), 1113-1122, 2001 | 526 | 2001 |
| A Gibbs sampling method to detect over-represented motifs in the upstream regions of co-expressed genes G Thijs, K Marchal, M Lescot, S Rombauts, B De Moor, P Rouzé, ... Proceedings of the fifth annual international conference on Computational …, 2001 | 485 | 2001 |
| Adaptive quality-based clustering of gene expression profiles F De Smet, J Mathys, K Marchal, G Thijs, B De Moor, Y Moreau Bioinformatics 18 (5), 735-746, 2002 | 264 | 2002 |
| Toucan: deciphering the cis ‐regulatory logic of coregulated genes S Aerts, G Thijs, B Coessens, M Staes, Y Moreau, BD Moor Nucleic acids research 31 (6), 1753-1764, 2003 | 237 | 2003 |
| TOUCAN 2: the all-inclusive open source workbench for regulatory sequence analysis S Aerts, P Van Loo, G Thijs, H Mayer, R De Martin, Y Moreau, B De Moor Nucleic acids research 33 (suppl_2), W393-W396, 2005 | 180 | 2005 |
| Computational detection of cis -regulatory modules S Aerts, P Van Loo, G Thijs, Y Moreau, B De Moor Bioinformatics 19 (suppl_2), ii5-ii14, 2003 | 162 | 2003 |
| INCLUSive: integrated clustering, upstream sequence retrieval and motif sampling G Thijs, Y Moreau, F De Smet, J Mathys, M Lescot, S Rombauts, P Rouze, ... Bioinformatics 18 (2), 331-332, 2002 | 97 | 2002 |
| Comprehensive analysis of the base composition around the transcription start site in Metazoa S Aerts, G Thijs, M Dabrowski, Y Moreau, B De Moor BMC genomics 5 (1), 1-10, 2004 | 82 | 2004 |
| Pharao: pharmacophore alignment and optimization J Taminau, G Thijs, H De Winter Journal of Molecular Graphics and Modelling 27 (2), 161-169, 2008 | 81 | 2008 |
| Functional bioinformatics of microarray data: from expression to regulation Y Moreau, F De Smet, G Thijs, K Marchal, B De Moor Proceedings of the IEEE 90 (11), 1722-1743, 2002 | 66 | 2002 |
| In silico identification and experimental validation of PmrAB targets in Salmonella typhimurium by regulatory motif detection K Marchal, S De Keersmaecker, P Monsieurs, N van Boxel, K Lemmens, ... Genome biology 5 (2), 1-20, 2004 | 65 | 2004 |
| INCLUSive: A web portal and service registry for microarray and regulatory sequence analysis B Coessens, G Thijs, S Aerts, K Marchal, F De Smet, K Engelen, ... Nucleic Acids Research 31 (13), 3468-3470, 2003 | 63 | 2003 |
| Genome-specific higher-order background models to improve motif detection K Marchal, G Thijs, S De Keersmaecker, P Monsieurs, B De Moor, ... Trends in microbiology 11 (2), 61-66, 2003 | 50 | 2003 |
| More robust detection of motifs in coexpressed genes by using phylogenetic information P Monsieurs, G Thijs, AA Fadda, SCJ De Keersmaecker, J Vanderleyden, ... BMC bioinformatics 7 (1), 1-15, 2006 | 25 | 2006 |
| A novel approach to identifying regulatory motifs in distantly related genomes R Van Hellemont, P Monsieurs, G Thijs, B De Moor, Y Van de Peer, ... Genome biology 6 (13), 1-18, 2005 | 18 | 2005 |
| Somatic tumor variant filtration strategies to optimize tumor-only molecular profiling using targeted next-generation sequencing panels MA Sukhai, M Misyura, M Thomas, S Garg, T Zhang, N Stickle, C Virtanen, ... The Journal of Molecular Diagnostics 21 (2), 261-273, 2019 | 12 | 2019 |
| Probabilistic methods to search for regulatory elements in sets of coregulated genes G Thijs Leuven: Faculty of Applied Sciences, Katholieke Universiteit Leuven, 2003 | 12 | 2003 |
