Chaste: an open source C++ library for computational physiology and biology GR Mirams, CJ Arthurs, MO Bernabeu, R Bordas, J Cooper, A Corrias, ... PLoS computational biology 9 (3), e1002970, 2013 | 513 | 2013 |
Chaste: a test-driven approach to software development for biological modelling J Pitt-Francis, P Pathmanathan, MO Bernabeu, R Bordas, J Cooper, ... Computer Physics Communications 180 (12), 2452-2471, 2009 | 308 | 2009 |
Multi-scale computational modelling in biology and physiology J Southern, J Pitt-Francis, J Whiteley, D Stokeley, H Kobashi, R Nobes, ... Progress in biophysics and molecular biology 96 (1-3), 60-89, 2008 | 238 | 2008 |
Comparing individual-based approaches to modelling the self-organization of multicellular tissues JM Osborne, AG Fletcher, JM Pitt-Francis, PK Maini, DJ Gavaghan PLoS computational biology 13 (2), e1005387, 2017 | 231 | 2017 |
An integrative computational model for intestinal tissue renewal IMM Van Leeuwen, GR Mirams, A Walter, A Fletcher, P Murray, J Osborne, ... Cell proliferation 42 (5), 617-636, 2009 | 187 | 2009 |
Cooperation, competition and antibiotic resistance in bacterial colonies I Frost, WPJ Smith, S Mitri, AS Millan, Y Davit, JM Osborne, JM Pitt-Francis, ... The ISME journal 12 (6), 1582-1593, 2018 | 182 | 2018 |
Cell morphology drives spatial patterning in microbial communities WPJ Smith, Y Davit, JM Osborne, W Kim, KR Foster, JM Pitt-Francis Proceedings of the National Academy of Sciences 114 (3), E280-E286, 2017 | 172 | 2017 |
A computational study of discrete mechanical tissue models P Pathmanathan, J Cooper, A Fletcher, G Mirams, P Murray, J Osborne, ... Physical biology 6 (3), 036001, 2009 | 148 | 2009 |
Computational assessment of drug‐induced effects on the electrocardiogram: from ion channel to body surface potentials N Zemzemi, MO Bernabeu, J Saiz, J Cooper, P Pathmanathan, ... British journal of pharmacology 168 (3), 718-733, 2013 | 131 | 2013 |
Development of a functional magnetic resonance imaging simulator for modeling realistic rigid‐body motion artifacts I Drobnjak, D Gavaghan, E Süli, J Pitt‐Francis, M Jenkinson Magnetic Resonance in Medicine: An Official Journal of the International …, 2006 | 127 | 2006 |
Chaste: using agile programming techniques to develop computational biology software J Pitt-Francis, MO Bernabeu, J Cooper, A Garny, L Momtahan, J Osborne, ... Philosophical Transactions of the Royal Society A: Mathematical, Physical …, 2008 | 107 | 2008 |
A numerical guide to the solution of the bidomain equations of cardiac electrophysiology P Pathmanathan, MO Bernabeu, R Bordas, J Cooper, A Garny, ... Progress in biophysics and molecular biology 102 (2-3), 136-155, 2010 | 102 | 2010 |
Chaste: cancer, heart and soft tissue environment FR Cooper, RE Baker, MO Bernabeu, R Bordas, L Bowler, ... Journal of Open Source Software 5 (47), 2020 | 75 | 2020 |
Ten simple rules for a successful cross-disciplinary collaboration B Knapp, R Bardenet, MO Bernabeu, R Bordas, M Bruna, B Calderhead, ... PLoS Computational Biology 11 (4), e1004214, 2015 | 70 | 2015 |
Development and analysis of patient-based complete conducting airways models R Bordas, C Lefevre, B Veeckmans, J Pitt-Francis, C Fetita, CE Brightling, ... PloS one 10 (12), e0144105, 2015 | 68 | 2015 |
Simulation of cardiac electrophysiology on next-generation high-performance computers R Bordas, B Carpentieri, G Fotia, F Maggio, R Nobes, J Pitt-Francis, ... Philosophical Transactions of the Royal Society A: Mathematical, Physical …, 2009 | 60 | 2009 |
Ten simple rules for effective computational research JM Osborne, MO Bernabeu, M Bruna, B Calderhead, J Cooper, ... PLoS Computational Biology 10 (3), e1003506, 2014 | 59 | 2014 |
Bayesian calibration, validation and uncertainty quantification for predictive modelling of tumour growth: a tutorial J Collis, AJ Connor, M Paczkowski, P Kannan, J Pitt-Francis, HM Byrne, ... Bulletin of mathematical biology 79, 939-974, 2017 | 55 | 2017 |
Abnormal morphology biases hematocrit distribution in tumor vasculature and contributes to heterogeneity in tissue oxygenation MO Bernabeu, J Köry, JA Grogan, B Markelc, A Beardo, M d’Avezac, ... Proceedings of the National Academy of Sciences 117 (45), 27811-27819, 2020 | 52 | 2020 |
Multiscale cardiac modelling reveals the origins of notched T waves in long QT syndrome type 2 A Sadrieh, L Domanski, J Pitt-Francis, SA Mann, EC Hodkinson, CA Ng, ... Nature communications 5 (1), 5069, 2014 | 52 | 2014 |