Jilong Li
Jilong Li
Omicsoft Corporation
Verified email at omicsoft.com
Title
Cited by
Cited by
Year
Prediction of homoprotein and heteroprotein complexes by protein docking and template-based modeling: A CASP-CAPRI experiment.
et al. M. Lensink, S. Velankar
Proteins 84 (Suppl 1), 323–348, 2016
97*2016
Proteomic Quantification and Site-Mapping of S-Nitrosylated Proteins Using Isobaric iodoTMT Reagents
Z Qu, F Meng, RD Bomgarden, RI Viner, J Li, JC Rogers, J Cheng, ...
Journal of proteome research 13 (7), 3200-3211, 2014
762014
WeFold: a coopetition for protein structure prediction
GA Khoury, A Liwo, F Khatib, H Zhou, G Chopra, J Bacardit, LO Bortot, ...
Proteins: Structure, Function, and Bioinformatics 82 (9), 1850-1868, 2014
592014
Large-Scale Model Quality Assessment for Improving Protein Tertiary Structure Prediction
R Cao, D Bhattacharya, B Adhikari, J Li, J Cheng
Bioinformatics 31 (12), i116-i123, 2015
502015
Transcriptomic analysis identifies gene networks regulated by estrogen receptor α (ERα) and ERβ that control distinct effects of different botanical estrogens
P Gong, Z Madak-Erdogan, J Li, J Cheng, CM Greenlief, W Helferich, ...
Nuclear receptor signaling 12 (1), nrs. 12001, 2014
462014
Male-specific lethal complex in Drosophila counteracts histone acetylation and does not mediate dosage compensation
L Sun, HR Fernandez, RC Donohue, J Li, J Cheng, JA Birchler
Proceedings of the National Academy of Sciences 110 (9), E808-E817, 2013
362013
The MULTICOM toolbox for protein structure prediction
J Cheng, J Li, Z Wang, J Eickholt, X Deng
BMC bioinformatics 13 (1), 65, 2012
332012
Dosage compensation and inverse effects in triple X metafemales of Drosophila
L Sun, AF Johnson, RC Donohue, J Li, J Cheng, JA Birchler
Proceedings of the National Academy of Sciences 110 (18), 7383-7388, 2013
252013
Differential effect of aneuploidy on the X chromosome and genes with sex-biased expression in Drosophila
L Sun, AF Johnson, J Li, AS Lambdin, J Cheng, JA Birchler
Proceedings of the National Academy of Sciences 110 (41), 16514-16519, 2013
242013
Designing and benchmarking the MULTICOM protein structure prediction system
J Li, X Deng, J Eickholt, J Cheng
BMC structural biology 13 (1), 2, 2013
232013
NitroDIGE analysis reveals inhibition of protein S-nitrosylation by epigallocatechin gallates in lipopolysaccharide-stimulated microglial cells
Z Qu, F Meng, H Zhou, J Li, Q Wang, F Wei, J Cheng, CM Greenlief, ...
Journal of neuroinflammation 11 (1), 17, 2014
222014
Massive integration of diverse protein quality assessment methods to improve template based modeling in CASP11
R Cao, D Bhattacharya, B Adhikari, J Li, J Cheng
Proteins, 2015
202015
A Large-Scale Conformation Sampling and Evaluation Server for Protein Tertiary Structure Prediction and its Assessment in CASP11
J Li, R Cao, J Cheng
BMC bioinformatics 16, 337, 2015
192015
Genes targeted by the HedgeHog-signaling pathway can be regulated by Estrogen related receptor
Y Lu, J Li, J Cheng, D Lubahn
BMC Molecular Biology 16 (1), 2015
162015
The MULTICOM protein tertiary structure prediction system
J Li, D Bhattacharya, R Cao, B Adhikari, X Deng, J Eickholt, J Cheng
Protein Structure Prediction, 29-41, 2014
162014
An analysis and evaluation of the WeFold collaborative for protein structure prediction and its pipelines in CASP11 and CASP12
C Keasar, LJ McGuffin, B Wallner, G Chopra, B Adhikari, D Bhattacharya, ...
Scientific reports 8 (1), 1-18, 2018
142018
Messenger RNA profile analysis deciphers new Esrrb responsive genes in prostate cancer cells
Y Lu, J Li, J Cheng, D Lubahn
BMC Molecular Biology 16 (1), 2015
142015
An Improved Integration of Template-based and Template-Free Protein Structure Modeling Methods and its Assessment in CASP11
JC Jilong Li, Badri Adhikari
Protein Pept. Lett 22 (7), 586-593, 2015
122015
Proteomic Analysis of the Effects of Aged Garlic Extract and its FruArg Component on Lipopolysaccharide-induced Neuroinflammatory Response in Microglial Cells
H Zhou, Z Qu, J Li
PLoS ONE 9, e113531, 2014
112014
From Gigabyte to Kilobyte: A Bioinformatics Protocol for Mining Large RNA-Seq Transcriptomics Data
J Li, J Hou, L Sun
PLoS ONE 10 (4), e0125000, 2015
82015
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