|Global transcriptomic analysis of Cyanothece 51142 reveals robust diurnal oscillation of central metabolic processes|
J Stöckel, EA Welsh, M Liberton, R Kunnvakkam, R Aurora, HB Pakrasi
Proceedings of the National Academy of Sciences 105 (16), 6156-6161, 2008
|A genome-based model for adjusting radiotherapy dose (GARD): a retrospective, cohort-based study|
JG Scott, A Berglund, MJ Schell, I Mihaylov, WJ Fulp, B Yue, E Welsh, ...
The Lancet Oncology 18 (2), 202-211, 2017
|The genome of Cyanothece 51142, a unicellular diazotrophic cyanobacterium important in the marine nitrogen cycle|
EA Welsh, M Liberton, J Stoeckel, T Loh, T Elvitigala, C Wang, A Wollam, ...
Proceedings of the National Academy of Sciences 105 (39), 15094-15099, 2008
|Differential transcriptional analysis of the cyanobacterium Cyanothece sp. strain ATCC 51142 during light-dark and continuous-light growth|
J Toepel, E Welsh, TC Summerfield, HB Pakrasi, LA Sherman
Journal of bacteriology 190 (11), 3904-3913, 2008
|Psb29, a conserved 22-kD protein, functions in the biogenesis of photosystem II complexes in Synechocystis and Arabidopsis|
N Keren, H Ohkawa, EA Welsh, M Liberton, HB Pakrasi
The Plant Cell 17 (10), 2768-2781, 2005
|Global proteomics reveal an atypical strategy for carbon/nitrogen assimilation by a cyanobacterium under diverse environmental perturbations|
KM Wegener, AK Singh, JM Jacobs, T Elvitigala, EA Welsh, N Keren, ...
Molecular & Cellular Proteomics 9 (12), 2678-2689, 2010
|Novel metabolic attributes of the genus Cyanothece, comprising a group of unicellular nitrogen-fixing cyanobacteria|
A Bandyopadhyay, T Elvitigala, E Welsh, J Stöckel, M Liberton, H Min, ...
MBio 2 (5), 2011
|Differential association of STK11 and TP53 with KRAS mutation-associated gene expression, proliferation and immune surveillance in lung adenocarcinoma|
MB Schabath, EA Welsh, WJ Fulp, L Chen, JK Teer, ZJ Thompson, ...
Oncogene 35 (24), 3209-3216, 2016
|Radiosensitivity differences between liver metastases based on primary histology suggest implications for clinical outcomes after stereotactic body radiation therapy|
KA Ahmed, JJ Caudell, G El-Haddad, AE Berglund, EA Welsh, B Yue, ...
International Journal of Radiation Oncology* Biology* Physics 95 (5), 1399-1404, 2016
|Dissection of TBK1 signaling via phosphoproteomics in lung cancer cells|
JY Kim, EA Welsh, U Oguz, B Fang, Y Bai, F Kinose, C Bronk, LLR Rix, ...
Proceedings of the National Academy of Sciences 110 (30), 12414-12419, 2013
|Iterative rank-order normalization of gene expression microarray data|
EA Welsh, SA Eschrich, AE Berglund, DA Fenstermacher
BMC bioinformatics 14 (1), 153, 2013
|Diurnal rhythms result in significant changes in the cellular protein complement in the cyanobacterium Cyanothece 51142|
J Stöckel, JM Jacobs, TR Elvitigala, M Liberton, EA Welsh, AD Polpitiya, ...
PloS one 6 (2), e16680, 2011
|High sensitivity proteomics assisted discovery of a novel operon involved in the assembly of photosystem II, a membrane protein complex|
KM Wegener, EA Welsh, LE Thornton, N Keren, JM Jacobs, KK Hixson, ...
Journal of Biological Chemistry 283 (41), 27829-27837, 2008
|Phosphoproteomics reveals MAPK inhibitors enhance MET-and EGFR-driven AKT signaling in KRAS-mutant lung cancer|
JY Kim, EA Welsh, B Fang, Y Bai, F Kinose, SA Eschrich, JM Koomen, ...
Molecular Cancer Research 14 (10), 1019-1029, 2016
|Critical role for apoptosis signal-regulating kinase 1 in the development of inflammatory K/BxN serum-induced arthritis|
SJ Mnich, PM Blanner, LG Hu, AF Shaffer, FA Happa, S O'Neil, O Ukairo, ...
International immunopharmacology 10 (10), 1170-1176, 2010
|Characterization of two potentially universal turn motifs that shape the repeated five‐residues fold—Crystal structure of a lumenal pentapeptide repeat protein from Cyanothece …|
GW Buchko, S Ni, H Robinson, EA Welsh, HB Pakrasi, MA Kennedy
Protein science 15 (11), 2579-2595, 2006
|Role of LKB1-CRTC1 on glycosylated COX-2 and response to COX-2 inhibition in lung cancer|
C Cao, R Gao, M Zhang, AL Amelio, M Fallahi, Z Chen, Y Gu, C Hu, ...
JNCI: Journal of the National Cancer Institute 107 (1), 2015
|Overexpression of major CDKN3 transcripts is associated with poor survival in lung adenocarcinoma|
C Fan, L Chen, Q Huang, T Shen, EA Welsh, JK Teer, J Cai, WD Cress, ...
British journal of cancer 113 (12), 1735-1743, 2015
|Radiosensitivity of lung metastases by primary histology and implications for stereotactic body radiation therapy using the genomically adjusted radiation dose|
KA Ahmed, JG Scott, JA Arrington, AO Naghavi, GD Grass, BA Perez, ...
Journal of Thoracic Oncology 13 (8), 1121-1127, 2018
|Expression of integrin alpha 10 is transcriptionally activated by pRb in mouse osteoblasts and is downregulated in multiple solid tumors|
BE Engel, E Welsh, MF Emmons, PG Santiago-Cardona, WD Cress
Cell death & disease 4 (11), e938-e938, 2013