Matthew Brandley, PhD
Matthew Brandley, PhD
Carnegie Museum of Natural History
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Cited by
Cited by
Partitioned Bayesian analyses, partition choice, and the phylogenetic relationships of scincid lizards
MC Brandley, A Schmitz, TW Reeder
Systematic biology 54 (3), 373-390, 2005
Why does a trait evolve multiple times within a clade? Repeated evolution of snake-like body form in squamate reptiles
JJ Wiens, MC Brandley, TW Reeder
Evolution 60 (1), 123-141, 2006
Rates and patterns in the evolution of snake-like body form in squamate reptiles: evidence for repeated re-evolution of lost digits and long-term persistence of intermediate …
MC Brandley, JP Huelsenbeck, JJ Wiens
Evolution 62 (8), 2042-2064, 2008
Accommodating heterogenous rates of evolution in molecular divergence dating methods: an example using intercontinental dispersal of Plestiodon (Eumeces) lizards
MC Brandley, Y Wang, X Guo, AN Montes de Oca, M Fería-Ortíz, T Hikida, ...
Systematic Biology 60 (1), 3-15, 2011
Seven new dolphin mitochondrial genomes and a time-calibrated phylogeny of whales
YE Xiong, MC Brandley, S Xu, K Zhou, G Yang
BMC Evolutionary Biology 9 (1), 1-13, 2009
FH Pough
Sinauer Associates, Incorporated, Publishers, 2016
Relaxed clocks and inferences of heterogeneous patterns of nucleotide substitution and divergence time estimates across whales and dolphins (Mammalia: Cetacea)
A Dornburg, MC Brandley, MR McGowen, TJ Near
Molecular Biology and Evolution 29 (2), 721-736, 2012
The evolution of viviparity: molecular and genomic data from squamate reptiles advance understanding of live birth in amniotes
JU Van Dyke, MC Brandley, MB Thompson
Reproduction 147 (1), R15-R26, 2014
Evidence for determinism in species diversification and contingency in phenotypic evolution during adaptive radiation
FT Burbrink, X Chen, EA Myers, MC Brandley, RA Pyron
Proceedings of the Royal Society B: Biological Sciences 279 (1748), 4817-4826, 2012
Opening the black box: phylogenetics and morphological evolution of the Malagasy fossorial lizards of the subfamily “Scincinae”
A Schmitz, MC Brandley, P Mausfeld, M Vences, F Glaw, RA Nussbaum, ...
Molecular Phylogenetics and Evolution 34 (1), 118-133, 2005
The phylogenetic systematics of blue-tailed skinks (Plestiodon) and the family Scincidae
MC Brandley, H OTA, T Hikida, A Nieto Montes De Oca, M Feria-Ortiz, ...
Zoological Journal of the Linnean Society 165 (1), 163-189, 2012
Ancestral state reconstructions require biological evidence to test evolutionary hypotheses: a case study examining the evolution of reproductive mode in squamate reptiles
OW Griffith, DG Blackburn, MC Brandley, JU Van Dyke, CM Whittington, ...
Journal of Experimental Zoology Part B: Molecular and Developmental …, 2015
Uterine gene expression in the live-bearing lizard, Chalcides ocellatus, reveals convergence of squamate and mammalian pregnancy mechanisms
MC Brandley, RL Young, DL Warren, MB Thompson, GP Wagner
Genome Biology and Evolution, 2012
A multi-locus phylogeny of Nectogalini shrews and influences of the paleoclimate on speciation and evolution
K He, YJ Li, MC Brandley, LK Lin, YX Wang, YP Zhang, XL Jiang
Molecular Phylogenetics and Evolution 56 (2), 734-746, 2010
Evaluating the performance of anchored hybrid enrichment at the tips of the tree of life: a phylogenetic analysis of Australian Eugongylus group scincid lizards
MC Brandley, JG Bragg, S Singhal, DG Chapple, CK Jennings, ...
BMC Evolutionary Biology 15 (1), 1-14, 2015
Convergence in trophic morphology and feeding performance among piscivorous natricine snakes
SE Vincent, MC Brandley, A Herrel, ME Alfaro
Journal of evolutionary biology 22 (6), 1203-1211, 2009
Data and data interpretation in the study of limb evolution: a reply to Galis et al. on the reevolution of digits in the lizard genus Bachia
T Kohlsdorf, VJ Lynch, MT Rodrigues, MC Brandley, GP Wagner
Evolution: International Journal of Organic Evolution 64 (8), 2477-2485, 2010
Which came first: the lizard or the egg? Robustness in phylogenetic reconstruction of ancestral states
AM Wright, KM Lyons, MC Brandley, DM Hillis
Journal of Experimental Zoology Part B: Molecular and Developmental …, 2015
Phylogeny, ecomorphological evolution, and historical biogeography of the Anolis cristatellus series
MC Brandley, K De Queiroz
Herpetological Monographs 18 (1), 2004
Are unequal clade priors problematic for Bayesian phylogenetics?
MC Brandley, AD Leaché, DL Warren, JA McGuire
Systematic biology 55 (1), 138-146, 2006
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