| DEEP: a general computational framework for predicting enhancers D Kleftogiannis, P Kalnis, VB Bajic Nucleic acids research 43 (1), e6-e6, 2015 | 97 | 2015 |
| DWFS: a wrapper feature selection tool based on a parallel genetic algorithm O Soufan, D Kleftogiannis, P Kalnis, VB Bajic PloS one 10 (2), e0117988, 2015 | 94 | 2015 |
| Progress and challenges in bioinformatics approaches for enhancer identification D Kleftogiannis, P Kalnis, VB Bajic Briefings in bioinformatics 17 (6), 967-979, 2016 | 59 | 2016 |
| Where we stand, where we are moving: Surveying computational techniques for identifying miRNA genes and uncovering their regulatory role D Kleftogiannis, A Korfiati, K Theofilatos, S Likothanassis, A Tsakalidis, ... Journal of biomedical informatics 46 (3), 563-573, 2013 | 47 | 2013 |
| DENdb: database of integrated human enhancers H Ashoor, D Kleftogiannis, A Radovanovic, VB Bajic Database 2015, 2015 | 39 | 2015 |
| Ultra-sensitive mutation detection and genome-wide DNA copy number reconstruction by error-corrected circulating tumor DNA sequencing S Mansukhani, LJ Barber, D Kleftogiannis, SY Moorcraft, M Davidson, ... Clinical chemistry 64 (11), 1626-1635, 2018 | 33 | 2018 |
| Comparing memory-efficient genome assemblers on stand-alone and cloud infrastructures D Kleftogiannis, P Kalnis, VB Bajic PloS one 8 (9), e75505, 2013 | 32 | 2013 |
| YamiPred: A novel evolutionary method for predicting pre-miRNAs and selecting relevant features D Kleftogiannis, K Theofilatos, S Likothanassis, S Mavroudi IEEE/ACM transactions on computational biology and bioinformatics 12 (5 …, 2015 | 28 | 2015 |
| EnsembleGASVR: a novel ensemble method for classifying missense single nucleotide polymorphisms T Rapakoulia, K Theofilatos, D Kleftogiannis, S Likothanasis, A Tsakalidis, ... Bioinformatics 30 (16), 2324-2333, 2014 | 14 | 2014 |
| Genome-wide plasma DNA methylation features of metastatic prostate cancer A Wu, P Cremaschi, D Wetterskog, V Conteduca, GM Franceschini, ... The Journal of Clinical Investigation 130 (4), 2020 | 12 | 2020 |
| Predicting human miRNA target genes using a novel computational intelligent framework A Korfiati, K Theofilatos, D Kleftogiannis, C Alexakos, S Likothanassis, ... Information Sciences 294, 576-585, 2015 | 10 | 2015 |
| The Human Interactome Knowledge Base (HINT-KB): an integrative human protein interaction database enriched with predicted protein–protein interaction scores using a novel … K Theofilatos, C Dimitrakopoulos, S Likothanassis, D Kleftogiannis, ... Artificial Intelligence Review 42 (3), 427-443, 2014 | 9* | 2014 |
| ncRNA-Class web tool: non-coding RNA feature extraction and pre-miRNA classification web tool D Kleftogiannis, K Theofilatos, S Papadimitriou, A Tsakalidis, ... IFIP International Conference on Artificial Intelligence Applications and …, 2012 | 7* | 2012 |
| In Vivo Modeling of Chemoresistant Neuroblastoma Provides New Insights into Chemorefractory Disease and Metastasis O Yogev, GS Almeida, KT Barker, SL George, C Kwok, J Campbell, ... Cancer research 79 (20), 5382-5393, 2019 | 6 | 2019 |
| Identification of single nucleotide variants using position-specific error estimation in deep sequencing data D Kleftogiannis, M Punta, A Jayaram, S Sandhu, SQ Wong, DG Tandefelt, ... BMC Medical Genomics 12 (1), 1-12, 2019 | 5 | 2019 |
| Predicting human miRNA target genes using a novel evolutionary methodology K Aigli, K Dimitris, T Konstantinos, L Spiros, T Athanasios, M Seferina Hellenic Conference on Artificial Intelligence, 291-298, 2012 | 5 | 2012 |
| A novel pre-miRNA classification approach for the prediction of microRNA genes KA Theofilatos, DA Kleftogiannis, MAV Rapsomaniki, VA Haidinis, ... Proceedings of the 10th IEEE International Conference on Information …, 2010 | 5 | 2010 |
| Discriminative identification of transcriptional responses of promoters and enhancers after stimulus D Kleftogiannis, P Kalnis, E Arner, VB Bajic Nucleic acids research 45 (4), e25-e25, 2017 | 4 | 2017 |
| Hi-Jack: a novel computational framework for pathway-based inference of host–pathogen interactions D Kleftogiannis, L Wong, JAC Archer, P Kalnis Bioinformatics 31 (14), 2332-2339, 2015 | 4 | 2015 |
| Development, application and evaluation of a 1-D full life cycle anchovy and sardine model for the North Aegean Sea (Eastern Mediterranean) A Gkanasos, S Somarakis, K Tsiaras, D Kleftogiannis, M Giannoulaki, ... PloS one 14 (8), e0219671, 2019 | 2 | 2019 |
Konstantinos TheofilatosKing's College LondonVerified email at kcl.ac.uk
