Benjamin Goudey
Benjamin Goudey
IBM Research - Australia
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Plasma lipidomic analysis of stable and unstable coronary artery disease
PJ Meikle, G Wong, D Tsorotes, CK Barlow, JM Weir, MJ Christopher, ...
Arteriosclerosis, thrombosis, and vascular biology 31 (11), 2723-2732, 2011
GWIS-model-free, fast and exhaustive search for epistatic interactions in case-control GWAS
B Goudey, D Rawlinson, Q Wang, F Shi, H Ferra, RM Campbell, L Stern, ...
BMC genomics 14 (3), 1-18, 2013
High performance computing enabling exhaustive analysis of higher order single nucleotide polymorphism interaction in Genome Wide Association Studies
B Goudey, M Abedini, JL Hopper, M Inouye, E Makalic, DF Schmidt, ...
Health information science and systems 3 (1), 1-11, 2015
Interactions within the MHC contribute to the genetic architecture of celiac disease
B Goudey, G Abraham, E Kikianty, Q Wang, D Rawlinson, F Shi, I Haviv, ...
PloS one 12 (3), e0172826, 2017
A blood-based signature of cerebrospinal fluid A β 1–42 status
B Goudey, BJ Fung, C Schieber, NG Faux
Scientific reports 9 (1), 1-12, 2019
GWISFI: A universal GPU interface for exhaustive search of pairwise interactions in case-control GWAS in minutes
Q Wang, F Shi, A Kowalczyk, RM Campbell, B Goudey, D Rawlinson, ...
2014 IEEE International Conference on Bioinformatics and Biomedicine (BIBM …, 2014
Lipid biomarkers for stable and unstable heart disease
PJ Meikle, I Haviv, BA Kingwell, J Bedo, B Goudey
US Patent 9,110,086, 2015
Cirrus: an automated mammography-based measure of breast cancer risk based on textural features
DF Schmidt, E Makalic, B Goudey, GS Dite, J Stone, TL Nguyen, ...
JNCI Cancer Spectrum 2 (4), pky057, 2018
Exploring effective approaches for haplotype block phasing
Z Al Bkhetan, J Zobel, A Kowalczyk, K Verspoor, B Goudey
BMC bioinformatics 20 (1), 1-14, 2019
Stability of bivariate GWAS biomarker detection
J Bedő, D Rawlinson, B Goudey, CS Ong
PloS one 9 (4), e93319, 2014
Supercomputing enabling exhaustive statistical analysis of genome wide association study data: Preliminary results
M Reumann, E Makalic, BW Goudey, M Inouye, A Bickerstaffe, M Bui, ...
2012 Annual International Conference of the IEEE Engineering in Medicine and …, 2012
Improved HLA-based prediction of coeliac disease identifies two novel genetic interactions
M Erlichster, J Bedo, E Skafidas, P Kwan, A Kowalczyk, B Goudey
European Journal of Human Genetics, 1-10, 2020
Cross-ethnicity tagging SNPs for HLA alleles associated with adverse drug reaction
M Erlichster, B Goudey, E Skafidas, P Kwan
The pharmacogenomics journal 19 (3), 230-239, 2019
Use of a novel nonparametric version of DEPTH to identify genomic regions associated with prostate cancer risk
RJ MacInnis, DF Schmidt, E Makalic, G Severi, LM FitzGerald, ...
Cancer Epidemiology and Prevention Biomarkers 25 (12), 1619-1624, 2016
A comparison of situation calculus and event calculus
B Goudey
Physical Review, 2007
Evaluation of consensus strategies for haplotype phasing
Z Al Bkhetan, G Chana, K Ramamohanarao, K Verspoor, B Goudey
Briefings in Bioinformatics 22 (4), bbaa280, 2021
Identifying interacting DNA loci using a contingency table, classification rules and statistical significance
A Kowalczyk, BW Goudey, E Kikianty
US Patent 9,965,584, 2018
A hybrid approach for automated mutation annotation of the extended human mutation landscape in scientific literature
AJ Yepes, A MacKinlay, N Gunn, C Schieber, N Faux, M Downton, ...
AMIA Annual Symposium Proceedings 2018, 616, 2018
Precision Medicine: Dawn of Supercomputing in ‘omics Research
M Reumann, KE Holt, M Inouye, T Stinear, B Goudey, G Abraham, ...
eResearch Australasia, 2011
Exploring Extensions to Machine-learning based Gene Normalisation
B Goudey, N Stokes, D Martinez
Proceedings of the Australasian Language Technology Workshop 2007, 143-145, 2007
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