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Jaspreet Singh
Jaspreet Singh
Verified email at griffithuni.edu.au
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Year
Toxicity prediction by multimodal deep learning
A Karim, J Singh, A Mishra, A Dehzangi, MA Newton, A Sattar
Pacific Rim Knowledge Acquisition Workshop, 142-152, 2019
192019
Improved RNA secondary structure and tertiary base-pairing prediction using evolutionary profile, mutational coupling and two-dimensional transfer learning
J Singh, K Paliwal, T Zhang, J Singh, T Litfin, Y Zhou
Bioinformatics 37 (17), 2589-2600, 2021
182021
SPOT-1D-Single: improving the single-sequence-based prediction of protein secondary structure, backbone angles, solvent accessibility and half-sphere exposures using a large …
J Singh, T Litfin, K Paliwal, J Singh, AK Hanumanthappa, Y Zhou
Bioinformatics 37 (20), 3464-3472, 2021
152021
Single-sequence and profile-based prediction of RNA solvent accessibility using dilated convolutional neural network
AK Hanumanthappa, J Singh, K Paliwal, J Singh, Y Zhou
Bioinformatics 36 (21), 5169-5176, 2021
122021
SPOT-Contact-LM: improving single-sequence-based prediction of protein contact map using a transformer language model
J Singh, T Litfin, J Singh, K Paliwal, Y Zhou
Bioinformatics 38 (7), 1888-1894, 2022
7*2022
RNA backbone torsion and pseudotorsion angle prediction using dilated convolutional neural networks
J Singh, K Paliwal, J Singh, Y Zhou
Journal of Chemical Information and Modeling 61 (6), 2610-2622, 2021
52021
Reaching alignment-profile-based accuracy in predicting protein secondary and tertiary structural properties without alignment
J Singh, K Paliwal, T Litfin, J Singh, Y Zhou
Scientific reports 12 (1), 1-9, 2022
12022
Predicting RNA distance-based contact maps by integrated deep learning on physics-inferred secondary structure and evolutionary-derived mutational coupling
J Singh, K Paliwal, T Litfin, J Singh, Y Zhou
Bioinformatics, 2022
2022
SPOT-1D2: Improving Protein Secondary Structure Prediction using High Sequence Identity Training Set and an Ensemble of Recurrent and Residual-convolutional Neural Networks
J Singh, J Singh, K Paliwal, A Busch, Y Zhou
2021 IEEE Conference on Computational Intelligence in Bioinformatics and …, 2021
2021
SPOT-1D-LM: Reaching Alignment-profile-based Accuracy in Predicting Protein Secondary and Tertiary Structural Properties without Alignment.
J Singh, K Paliwal, J Singh, Y Zhou
bioRxiv, 2021
2021
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