Hao Ge
Hao Ge
Associate professor of Beijing International Center for Mathematical Research, Peking University
Verified email at pku.edu.cn - Homepage
TitleCited byYear
Mechanism of transcriptional bursting in bacteria
S Chong, C Chen, H Ge, XS Xie
Cell 158 (2), 314-326, 2014
2022014
Physical origins of entropy production, free energy dissipation, and their mathematical representations
H Ge, H Qian
Physical Review E 81 (5), 051133, 2010
1692010
Probing allostery through DNA
S Kim, E Broströmer, D Xing, J Jin, S Chong, H Ge, S Wang, C Gu, L Yang, ...
Science 339 (6121), 816-819, 2013
1632013
Stochastic theory of nonequilibrium steady states. Part II: Applications in chemical biophysics
H Ge, M Qian, H Qian
Physics Reports 510 (3), 87-118, 2012
1282012
Genome‐wide study of mRNA degradation and transcript elongation in Escherichia coli
H Chen, K Shiroguchi, H Ge, XS Xie
Molecular systems biology 11 (1), 2015
1152015
Thermodynamic limit of a nonequilibrium steady state: Maxwell-type construction for a bistable biochemical system
H Ge, H Qian
Physical review letters 103 (14), 148103, 2009
582009
Stochastic phenotype transition of a single cell in an intermediate region of gene state switching
H Ge, H Qian, XS Xie
Physical review letters 114 (7), 078101, 2015
572015
Non-equilibrium phase transition in mesoscopic biochemical systems: from stochastic to nonlinear dynamics and beyond
H Ge, H Qian
Journal of the Royal Society Interface 8 (54), 107-116, 2010
482010
Landscapes of non-gradient dynamics without detailed balance: Stable limit cycles and multiple attractors
H Ge, H Qian
Chaos: An Interdisciplinary Journal of Nonlinear Science 22 (2), 023140-023140-8, 2012
442012
Extended forms of the second law for general time-dependent stochastic processes
H Ge
Physical Review E 80 (2), 021137, 2009
412009
Synchronized dynamics and non-equilibrium steady states in a stochastic yeast cell-cycle network
H Ge, H Qian, M Qian
Mathematical biosciences 211 (1), 132-152, 2008
342008
Markov processes follow from the principle of maximum caliber
H Ge, S Pressé, K Ghosh, KA Dill
The Journal of chemical physics 136 (6), 064108, 2012
292012
Generalized Jarzynski’s equality of inhomogeneous multidimensional diffusion processes
H Ge, DQ Jiang
Journal of Statistical Physics 131 (4), 675-689, 2008
282008
Dissipation, generalized free energy, and a self-consistent nonequilibrium thermodynamics of chemically driven open subsystems
H Ge, H Qian
Physical Review E 87 (6), 062125, 2013
26*2013
Boolean network approach to negative feedback loops of the p53 pathways: synchronized dynamics and stochastic limit cycles
H Ge, M Qian
Journal of Computational Biology 16 (1), 119-132, 2009
242009
Time reversibility and nonequilibrium thermodynamics of second-order stochastic processes
H Ge
Physical Review E 89 (2), 022127, 2014
232014
Tracing the temporal-spatial transcriptome landscapes of the human fetal digestive tract using single-cell RNA-sequencing
S Gao, L Yan, R Wang, J Li, J Yong, X Zhou, Y Wei, X Wu, X Wang, X Fan, ...
Nature cell biology 20 (6), 721, 2018
212018
Mathematical formalism of nonequilibrium thermodynamics for nonlinear chemical reaction systems with general rate law
H Ge, H Qian
Journal of Statistical Physics 166 (1), 190-209, 2017
212017
The transient fluctuation theorem of sample entropy production for general stochastic processes
H Ge, DQ Jiang
Journal of Physics A: Mathematical and Theoretical 40 (30), F713, 2007
202007
Mesoscopic kinetic basis of macroscopic chemical thermodynamics: A mathematical theory
H Ge, H Qian
Physical Review E 94 (5), 052150, 2016
192016
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