| On cherry-picking and network containment R Janssen, Y Murakami Theoretical Computer Science 856, 121-150, 2021 | 32* | 2021 |
| Exploring the tiers of rooted phylogenetic network space using tail moves R Janssen, M Jones, PL Erdős, L van Iersel, C Scornavacca Bulletin of mathematical biology 80 (8), 2177-2208, 2018 | 26 | 2018 |
| Orienting undirected phylogenetic networks KT Huber, L van Iersel, R Janssen, M Jones, V Moulton, Y Murakami, ... Journal of Computer and System Sciences 140, 103480, 2024 | 21* | 2024 |
| Distinguishing level-1 phylogenetic networks on the basis of data generated by Markov processes E Gross, L van Iersel, R Janssen, M Jones, C Long, Y Murakami Journal of Mathematical Biology 83 (3), 1-24, 2021 | 19 | 2021 |
| Reconstructing tree-child networks from reticulate-edge-deleted subnetworks Y Murakami, L van Iersel, R Janssen, M Jones, V Moulton Bulletin of mathematical biology 81, 3823-3863, 2019 | 18 | 2019 |
| Polynomial-Time Algorithms for Phylogenetic Inference Problems involving duplication and reticulation. L van Iersel, R Janssen, M Jones, Y Murakami, N Zeh IEEE/ACM transactions on computational biology and bioinformatics, 2019 | 18* | 2019 |
| A practical fixed-parameter algorithm for constructing tree-child networks from multiple binary trees L van Iersel, R Janssen, M Jones, Y Murakami, N Zeh Algorithmica 84 (4), 917-960, 2022 | 15 | 2022 |
| A unifying characterization of tree-based networks and orchard networks using cherry covers L van Iersel, R Janssen, M Jones, Y Murakami, N Zeh Advances in Applied Mathematics 129, 102222, 2021 | 15 | 2021 |
| Comparing the topology of phylogenetic network generators R Janssen, P Liu Journal of Bioinformatics and Computational Biology 19 (6), 2140012, 2021 | 13 | 2021 |
| Orchard Networks are Trees with Additional Horizontal Arcs L van Iersel, R Janssen, M Jones, Y Murakami Bulletin of Mathematical Biology 84 (8), 1-21, 2022 | 11 | 2022 |
| Treewidth of display graphs: bounds, brambles and applications R Janssen, M Jones, S Kelk, G Stamoulis, T Wu Journal of Graph Algorithms and Applications 23 (4), 715-743, 2019 | 11 | 2019 |
| The Burning Number of Directed Graphs: Bounds and Computational Complexity R Janssen Theory and Applications of Graphs 7 (1), 8, 2020 | 9 | 2020 |
| Linear Time Algorithm for Tree-Child Network Containment R Janssen, Y Murakami International Conference on Algorithms for Computational Biology, 93-107, 2020 | 9 | 2020 |
| Heading in the right direction? Using head moves to traverse phylogenetic network space R Janssen Journal of Graph Algorithms and Applications 25 (1), 263-310, 2021 | 8 | 2021 |
| Combining Networks Using Cherry Picking Sequences R Janssen, M Jones, Y Murakami International Conference on Algorithms for Computational Biology, 77-92, 2020 | 7 | 2020 |
| Rearrangement operations on unrooted phylogenetic networks R Janssen, J Klawitter Theory and Applications of Graphs 6 (2), 6, 2019 | 6 | 2019 |
| Cutting an alignment with Ockham's razor M Jones, P Gambette, L van Iersel, R Janssen, S Kelk, F Pardi, ... arXiv preprint arXiv:1910.11041, 2019 | 4 | 2019 |
| A near-linear kernel for bounded-state parsimony distance E Deen, L van Iersel, R Janssen, M Jones, Y Murakami, N Zeh Journal of Computer and System Sciences 140, 103477, 2024 | 1* | 2024 |
| Level-2 networks from shortest and longest distances KT Huber, L van Iersel, R Janssen, M Jones, V Moulton, Y Murakami Discrete Applied Mathematics 306, 138-165, 2022 | 1 | 2022 |
| Rearranging Phylogenetic Networks R Janssen Delft University of Technology, 2021 | 1 | 2021 |
Yukihiro MurakamiAssistant Professor, TU DelftVerified email at tudelft.nl
