|Deriving accurate microbiota profiles from human samples with low bacterial content through post-sequencing processing of Illumina MiSeq data|
J Jervis-Bardy, LEX Leong, S Marri, RJ Smith, JM Choo, ...
Microbiome 3 (1), 19, 2015
|Metagenomic comparison of microbial communities inhabiting confined and unconfined aquifer ecosystems|
RJ Smith, TC Jeffries, B Roudnew, AJ Fitch, JR Seymour, MW Delpin, ...
Environmental microbiology 14 (1), 240-253, 2012
|Substrate type determines metagenomic profiles from diverse chemical habitats|
TC Jeffries, JR Seymour, JA Gilbert, EA Dinsdale, K Newton, ...
PloS one 6 (9), e25173, 2011
|Random whole metagenomic sequencing for forensic discrimination of soils|
AS Khodakova, RJ Smith, L Burgoyne, D Abarno, A Linacre
PloS one 9 (8), e104996, 2014
|The microbiome of otitis media with effusion in Indigenous Australian children|
J Jervis-Bardy, GB Rogers, PS Morris, HC Smith-Vaughan, E Nosworthy, ...
International journal of pediatric otorhinolaryngology 79 (9), 1548-1555, 2015
|Increases in the abundance of microbial genes encoding halotolerance and photosynthesis along a sediment salinity gradient|
TC Jeffries, JR Seymour, K Newton, RJ Smith, L Seuront, JG Mitchell
Biogeosciences 9 (2), 815-825, 2012
|Bacterial and virus‐like particle abundances in purged and unpurged groundwater depth profiles|
B Roudnew, JR Seymour, TC Jeffries, TJ Lavery, RJ Smith, JG Mitchell
Groundwater Monitoring & Remediation 32 (4), 72-77, 2012
|A polyphasic approach for assessing the suitability of bioremediation for the treatment of hydrocarbon-impacted soil|
EM Adetutu, RJ Smith, J Weber, S Aleer, JG Mitchell, AS Ball, AL Juhasz
Science of the total environment 450, 51-58, 2013
|Confined aquifers as viral reservoirs|
RJ Smith, TC Jeffries, B Roudnew, JR Seymour, AJ Fitch, KL Simons, ...
Environmental microbiology reports 5 (5), 725-730, 2013
|Putative effect of aquifer recharge on the abundance and taxonomic composition of endemic microbial communities|
RJ Smith, JS Paterson, CA Sibley, JL Hutson, JG Mitchell
PloS one 10 (6), e0129004, 2015
|Determining the metabolic footprints of hydrocarbon degradation using multivariate analysis|
RJ Smith, TC Jeffries, EM Adetutu, PG Fairweather, JG Mitchell
PLoS One 8 (11), e81910, 2013
|Spatially varying complexity of bacterial and virus-like particle communities within an aquifer system|
B Roudnew, TJ Lavery, JR Seymour, RJ Smith, JG Mitchell
Aquatic Microbial Ecology 68 (3), 259-266, 2013
|Persistence, loss and appearance of bacteria upstream and downstream of a river system|
LM Dann, RJ Smith, TC Jeffries, JC McKerral, PG Fairweather, RL Oliver, ...
Marine and Freshwater Research 68 (5), 851-862, 2017
|Marine and giant viruses as indicators of a marine microbial community in a riverine system|
LM Dann, S Rosales, J McKerral, JS Paterson, RJ Smith, TC Jeffries, ...
Microbiologyopen 5 (6), 1071-1084, 2016
|Stygofauna enhance prokaryotic transport in groundwater ecosystems|
RJ Smith, JS Paterson, E Launer, SS Tobe, E Morello, R Leijs, S Marri, ...
Scientific reports 6, 32738, 2016
|Host‐specific associations affect the microbiome of Philornis downsi, an introduced parasite to the Galápagos Islands|
M Ben‐Yosef, DSY Zaada, RY Dudaniec, Z Pasternak, E Jurkevitch, ...
Molecular ecology 26 (18), 4644-4656, 2017
|Surface modification of an organic hessian substrate leads to shifts in bacterial biofilm community composition and abundance|
JS Paterson, S Ogden, RJ Smith, MW Delpin, JG Mitchell, JS Quinton
Journal of biotechnology 219, 90-97, 2016
|Microscale distributions of freshwater planktonic viruses and prokaryotes are patchy and taxonomically distinct|
LM Dann, RJ Smith, SS Tobe, JS Paterson, RL Oliver, JG Mitchell
Aquatic Microbial Ecology 77 (2), 65-77, 2016
|Microbial composition analyses by 16S rRNA sequencing: A proof of concept approach to provenance determination of archaeological ochre|
CE Lenehan, SS Tobe, RJ Smith, RS Popelka-Filcoff
PloS one 12 (10), e0185252, 2017
|Taxonomic and metabolic shifts in the Coorong bacterial metagenome driven by salinity and external inputs|
K Newton, TC Jeffries, RJ Smith, JR Seymour, L Seuront, JG Mitchell
Journal of Oceanology and Limnology 36 (6), 2033-2049, 2018