Yan Wei Lim
Title
Cited by
Cited by
Year
Metagenomic analysis of viruses in reclaimed water
K Rosario, C Nilsson, YW Lim, Y Ruan, M Breitbart
Environmental microbiology 11 (11), 2806-2820, 2009
2772009
Lytic to temperate switching of viral communities
B Knowles, CB Silveira, BA Bailey, K Barott, VA Cantu, ...
Nature 531 (7595), 466-470, 2016
2612016
Broad surveys of DNA viral diversity obtained through viral metagenomics of mosquitoes
TFF Ng, DL Willner, YW Lim, R Schmieder, B Chau, C Nilsson, S Anthony, ...
PloS one 6 (6), e20579, 2011
1972011
TagCleaner: Identification and removal of tag sequences from genomic and metagenomic datasets
R Schmieder, YW Lim, F Rohwer, R Edwards
BMC bioinformatics 11 (1), 1-14, 2010
1962010
Identification and removal of ribosomal RNA sequences from metatranscriptomes
R Schmieder, YW Lim, R Edwards
Bioinformatics 28 (3), 433-435, 2012
1742012
Spatial distribution of microbial communities in the cystic fibrosis lung
D Willner, MR Haynes, M Furlan, R Schmieder, YW Lim, PB Rainey, ...
The ISME journal 6 (2), 471-474, 2012
1632012
Local genomic adaptation of coral reef-associated microbiomes to gradients of natural variability and anthropogenic stressors
LW Kelly, GJ Williams, KL Barott, CA Carlson, EA Dinsdale, RA Edwards, ...
Proceedings of the National Academy of Sciences 111 (28), 10227-10232, 2014
1562014
Metagenomics and metatranscriptomics: windows on CF-associated viral and microbial communities
YW Lim, R Schmieder, M Haynes, D Willner, M Furlan, M Youle, K Abbott, ...
Journal of Cystic Fibrosis 12 (2), 154-164, 2013
1412013
Global microbialization of coral reefs
AF Haas, MFM Fairoz, LW Kelly, CE Nelson, EA Dinsdale, RA Edwards, ...
Nature microbiology 1 (6), 1-7, 2016
1192016
Breath gas metabolites and bacterial metagenomes from cystic fibrosis airways indicate active pH neutral 2, 3-butanedione fermentation
KL Whiteson, S Meinardi, YW Lim, R Schmieder, H Maughan, R Quinn, ...
The ISME journal 8 (6), 1247-1258, 2014
1052014
Clinical insights from metagenomic analysis of sputum samples from patients with cystic fibrosis
YW Lim, JS Evangelista, R Schmieder, B Bailey, M Haynes, M Furlan, ...
Journal of clinical microbiology 52 (2), 425-437, 2014
1012014
Case studies of the spatial heterogeneity of DNA viruses in the cystic fibrosis lung
D Willner, MR Haynes, M Furlan, N Hanson, B Kirby, YW Lim, PB Rainey, ...
American journal of respiratory cell and molecular biology 46 (2), 127-131, 2012
1002012
Biogeochemical forces shape the composition and physiology of polymicrobial communities in the cystic fibrosis lung
RA Quinn, YW Lim, H Maughan, D Conrad, F Rohwer, KL Whiteson
MBio 5 (2), 2014
892014
The upper respiratory tract as a microbial source for pulmonary infections in cystic fibrosis. Parallels from island biogeography
KL Whiteson, B Bailey, M Bergkessel, D Conrad, L Delhaes, B Felts, ...
American journal of respiratory and critical care medicine 189 (11), 1309-1315, 2014
802014
Microbial, host and xenobiotic diversity in the cystic fibrosis sputum metabolome
RA Quinn, VV Phelan, KL Whiteson, N Garg, BA Bailey, YW Lim, ...
The ISME journal 10 (6), 1483-1498, 2016
662016
Mass spectral similarity for untargeted metabolomics data analysis of complex mixtures
N Garg, CA Kapono, YW Lim, N Koyama, MJA Vermeij, D Conrad, ...
International Journal of Mass Spectrometry 377, 719-727, 2015
652015
Three-dimensional microbiome and metabolome cartography of a diseased human lung
N Garg, M Wang, E Hyde, RR da Silva, AV Melnik, I Protsyuk, ...
Cell host & microbe 22 (5), 705-716. e4, 2017
592017
A Winogradsky-based culture system shows an association between microbial fermentation and cystic fibrosis exacerbation
RA Quinn, K Whiteson, YW Lim, P Salamon, B Bailey, S Mienardi, ...
The ISME journal 9 (4), 1024-1038, 2015
572015
Identification of a novel human papillomavirus by metagenomic analysis of samples from patients with febrile respiratory illness
JL Mokili, BE Dutilh, YW Lim, BS Schneider, T Taylor, MR Haynes, ...
PloS one 8 (3), e58404, 2013
552013
Species-specific viromes in the ancestral holobiont Hydra
JA Grasis, T Lachnit, F Anton-Erxleben, YW Lim, R Schmieder, S Fraune, ...
PLoS One 9 (10), e109952, 2014
532014
The system can't perform the operation now. Try again later.
Articles 1–20