| Greengenes, a chimera-checked 16S rRNA gene database and workbench compatible with ARB TZ DeSantis, P Hugenholtz, N Larsen, M Rojas, EL Brodie, K Keller, ... Applied and environmental microbiology 72 (7), 5069-5072, 2006 | 8606 | 2006 |
| Induction of intestinal Th17 cells by segmented filamentous bacteria II Ivanov, K Atarashi, N Manel, EL Brodie, T Shima, U Karaoz, D Wei, ... Cell 139 (3), 485-498, 2009 | 3533 | 2009 |
| NAST: a multiple sequence alignment server for comparative analysis of 16S rRNA genes TZ DeSantis, P Hugenholtz, K Keller, EL Brodie, N Larsen, YM Piceno, ... Nucleic acids research 34 (suppl_2), W394-W399, 2006 | 1087 | 2006 |
| Urban aerosols harbor diverse and dynamic bacterial populations EL Brodie, TZ DeSantis, JPM Parker, IX Zubietta, YM Piceno, ... Proceedings of the National Academy of Sciences 104 (1), 299-304, 2007 | 690 | 2007 |
| Airway microbiota and bronchial hyperresponsiveness in patients with suboptimally controlled asthma YJ Huang, CE Nelson, EL Brodie, TZ DeSantis, MS Baek, J Liu, T Woyke, ... Journal of Allergy and Clinical Immunology 127 (2), 372-381. e3, 2011 | 564 | 2011 |
| High-density universal 16S rRNA microarray analysis reveals broader diversity than typical clone library when sampling the environment TZ DeSantis, EL Brodie, JP Moberg, IX Zubieta, YM Piceno, GL Andersen Microbial ecology 53 (3), 371-383, 2007 | 551 | 2007 |
| Thousands of microbial genomes shed light on interconnected biogeochemical processes in an aquifer system K Anantharaman, CT Brown, LA Hug, I Sharon, CJ Castelle, AJ Probst, ... Nature communications 7 (1), 1-11, 2016 | 538 | 2016 |
| Application of a high-density oligonucleotide microarray approach to study bacterial population dynamics during uranium reduction and reoxidation EL Brodie, TZ DeSantis, DC Joyner, SM Baek, JT Larsen, GL Andersen, ... Applied and environmental microbiology 72 (9), 6288-6298, 2006 | 515 | 2006 |
| Environmental genomics reveals a single-species ecosystem deep within Earth D Chivian, EL Brodie, EJ Alm, DE Culley, PS Dehal, TZ DeSantis, ... Science 322 (5899), 275-278, 2008 | 410 | 2008 |
| Dynamic root exudate chemistry and microbial substrate preferences drive patterns in rhizosphere microbial community assembly K Zhalnina, KB Louie, Z Hao, N Mansoori, UN da Rocha, S Shi, H Cho, ... Nature microbiology 3 (4), 470-480, 2018 | 387 | 2018 |
| Airway microbiota and pathogen abundance in age-stratified cystic fibrosis patients MJ Cox, M Allgaier, B Taylor, MS Baek, YJ Huang, RA Daly, U Karaoz, ... PloS one 5 (6), e11044, 2010 | 377 | 2010 |
| Long-term sustainability of a high-energy, low-diversity crustal biome LH Lin, PL Wang, D Rumble, J Lippmann-Pipke, E Boice, LM Pratt, ... Science 314 (5798), 479-482, 2006 | 358 | 2006 |
| Differential growth responses of soil bacterial taxa to carbon substrates of varying chemical recalcitrance KC Goldfarb, U Karaoz, CA Hanson, CA Santee, MA Bradford, ... Frontiers in microbiology 2, 94, 2011 | 353 | 2011 |
| Differential growth responses of soil bacterial taxa to carbon substrates of varying chemical recalcitrance KC Goldfarb, U Karaoz, CA Hanson, CA Santee, MA Bradford, ... Frontiers in microbiology 2, 94, 2011 | 353 | 2011 |
| Bacterial diversity and White Plague Disease-associated community changes in the Caribbean coral Montastraea faveolata S Sunagawa, TZ DeSantis, YM Piceno, EL Brodie, MK DeSalvo, ... The ISME journal 3 (5), 512-521, 2009 | 341 | 2009 |
| Rainfall-induced carbon dioxide pulses result from sequential resuscitation of phylogenetically clustered microbial groups SA Placella, EL Brodie, MK Firestone Proceedings of the National Academy of Sciences 109 (27), 10931-10936, 2012 | 308 | 2012 |
| A novel ecological role of the Firmicutes identified in thermophilic microbial fuel cells KC Wrighton, P Agbo, F Warnecke, KA Weber, EL Brodie, TZ DeSantis, ... The ISME journal 2 (11), 1146-1156, 2008 | 304 | 2008 |
| Diversity of 16S rRNA genes within individual prokaryotic genomes AY Pei, WE Oberdorf, CW Nossa, A Agarwal, P Chokshi, EA Gerz, Z Jin, ... Applied and environmental microbiology 76 (12), 3886-3897, 2010 | 287 | 2010 |
| Selective progressive response of soil microbial community to wild oat roots KM DeAngelis, EL Brodie, TZ DeSantis, GL Andersen, SE Lindow, ... The ISME journal 3 (2), 168-178, 2009 | 275 | 2009 |
| Design of 16S rRNA gene primers for 454 pyrosequencing of the human foregut microbiome CW Nossa, WE Oberdorf, L Yang, JA Aas, BJ Paster, TZ DeSantis, ... World journal of gastroenterology: WJG 16 (33), 4135, 2010 | 270 | 2010 |
